RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 RCVRNP35243 200 aa20.3■□□□□ 0.84
TSEN54-201ENST00000333213 CDK10Q15131 360 aa20.3■□□□□ 0.84
TSEN54-201ENST00000333213 UNQ9370/PRO34162Q6UXP9 181 aa20.3■□□□□ 0.84
TSEN54-201ENST00000333213 GABRG1Q8N1C3 465 aa20.3■□□□□ 0.84
TSEN54-201ENST00000333213 ZNF676Q8N7Q3 588 aa20.3■□□□□ 0.84
TSEN54-201ENST00000333213 KCNJ15Q99712 375 aa20.3■□□□□ 0.84
TSEN54-201ENST00000333213 OPN3Q9H1Y3 402 aaPredicted RBP20.3■□□□□ 0.84
TSEN54-201ENST00000333213 TPK1Q9H3S4 243 aa20.3■□□□□ 0.84
TSEN54-201ENST00000333213 C5orf63A6NC05 138 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 PIN1P1O15428 100 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 CNOT4O95628 575 aaKnown RBP20.29■□□□□ 0.84
TSEN54-201ENST00000333213 CLEC2LP0C7M8 214 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 CRYGSP22914 178 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 CX3CR1P49238 355 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 ZNF121P58317 390 aaPredicted RBP20.29■□□□□ 0.84
TSEN54-201ENST00000333213 GRB2P62993 217 aaKnown RBP20.29■□□□□ 0.84
TSEN54-201ENST00000333213 RAB35Q15286 201 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 CPEB3Q8NE35 698 aaKnown RBP20.29■□□□□ 0.84
TSEN54-201ENST00000333213 LILRB4Q8NHJ6 448 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 ORAI1Q96D31 301 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 NIPAL2Q9H841 368 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 SH3BGRL2Q9UJC5 107 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 OR6C6A6NF89 314 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 F5H5K5 113 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 LYZL6O75951 148 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 TTRP02766 147 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 CRHP06850 196 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 HGFACQ04756 655 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 MXD1Q05195 221 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 TSC22D1Q15714 1073 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 SFRP5Q5T4F7 317 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 ANKRD16Q6P6B7 361 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 ASCC1Q8N9N2 400 aaKnown RBP20.29■□□□□ 0.84
TSEN54-201ENST00000333213 PBOV1Q9GZY1 135 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 KCNN2Q9H2S1 579 aa20.29■□□□□ 0.84
TSEN54-201ENST00000333213 TRBV5-5A0A0J9YX44 114 aa20.28■□□□□ 0.84
TSEN54-201ENST00000333213 ACOD1A6NK06 481 aa20.28■□□□□ 0.84
TSEN54-201ENST00000333213 AZGP1P25311 298 aaKnown RBP20.28■□□□□ 0.84
TSEN54-201ENST00000333213 PCBD1P61457 104 aa20.28■□□□□ 0.84
TSEN54-201ENST00000333213 PMPCAQ10713 525 aa20.28■□□□□ 0.84
TSEN54-201ENST00000333213 KRTAP27-1Q3LI81 207 aa20.28■□□□□ 0.84
TSEN54-201ENST00000333213 TBRG1Q3YBR2 411 aa20.28■□□□□ 0.84
TSEN54-201ENST00000333213 PABPC1L2AQ5JQF8 200 aa20.28■□□□□ 0.84
TSEN54-201ENST00000333213 OR1F12Q8NHA8 337 aa20.28■□□□□ 0.84
TSEN54-201ENST00000333213 TRAF4Q9BUZ4 470 aaPredicted RBP20.28■□□□□ 0.84
TSEN54-201ENST00000333213 COMMD4Q9H0A8 199 aa20.28■□□□□ 0.84
TSEN54-201ENST00000333213 HDHD2Q9H0R4 259 aa20.28■□□□□ 0.84
TSEN54-201ENST00000333213 C11orf54Q9H0W9 315 aaPredicted RBP20.28■□□□□ 0.84
TSEN54-201ENST00000333213 RNF121Q9H920 327 aa20.28■□□□□ 0.84
TSEN54-201ENST00000333213 PROCRQ9UNN8 238 aa20.28■□□□□ 0.84
TSEN54-201ENST00000333213 USP24Q9UPU5 2620 aa20.28■□□□□ 0.84
TSEN54-201ENST00000333213 SHANK1Q9Y566 2161 aa20.28■□□□□ 0.84
TSEN54-201ENST00000333213 SMIM30A4D0T7 59 aa20.27■□□□□ 0.84
TSEN54-201ENST00000333213 COX5AP20674 150 aa20.27■□□□□ 0.84
TSEN54-201ENST00000333213 SLC36A2Q495M3 483 aa20.27■□□□□ 0.84
TSEN54-201ENST00000333213 ZNF433Q8N7K0 673 aaPredicted RBP20.27■□□□□ 0.84
TSEN54-201ENST00000333213 ZFP3Q96NJ6 502 aa20.27■□□□□ 0.84
TSEN54-201ENST00000333213 WACQ9BTA9 647 aa20.27■□□□□ 0.84
TSEN54-201ENST00000333213 SLA2Q9H6Q3 261 aa20.27■□□□□ 0.84
TSEN54-201ENST00000333213 ZNF879B4DU55 563 aa20.27■□□□□ 0.84
TSEN54-201ENST00000333213 RAD51DO75771 328 aa20.27■□□□□ 0.84
TSEN54-201ENST00000333213 SERPINA3P01011 423 aa20.27■□□□□ 0.84
TSEN54-201ENST00000333213 MYL9P24844 172 aa20.27■□□□□ 0.84
TSEN54-201ENST00000333213 MRPS15P82914 257 aaKnown RBP20.27■□□□□ 0.84
TSEN54-201ENST00000333213 C1QTNF12Q5T7M4 302 aa20.27■□□□□ 0.84
TSEN54-201ENST00000333213 LIX1LQ8IVB5 337 aa20.27■□□□□ 0.84
TSEN54-201ENST00000333213 ELMOD2Q8IZ81 293 aa20.27■□□□□ 0.84
TSEN54-201ENST00000333213 ZNF283Q8N7M2 679 aa20.27■□□□□ 0.84
TSEN54-201ENST00000333213 B3GNT2Q9NY97 397 aa20.27■□□□□ 0.84
TSEN54-201ENST00000333213 NUFIP1Q9UHK0 495 aaKnown RBP20.27■□□□□ 0.84
TSEN54-201ENST00000333213 ISG15P05161 165 aa20.26■□□□□ 0.83
TSEN54-201ENST00000333213 UCHL1P09936 223 aa20.26■□□□□ 0.83
TSEN54-201ENST00000333213 SOX2P48431 317 aa20.26■□□□□ 0.83
TSEN54-201ENST00000333213 Q499Y3 187 aa20.26■□□□□ 0.83
TSEN54-201ENST00000333213 BCL2L15Q5TBC7 163 aa20.26■□□□□ 0.83
TSEN54-201ENST00000333213 NR2C2APQ86WQ0 139 aa20.26■□□□□ 0.83
TSEN54-201ENST00000333213 OR8B12Q8NGG6 310 aa20.26■□□□□ 0.83
TSEN54-201ENST00000333213 RNF170Q96K19 258 aa20.26■□□□□ 0.83
TSEN54-201ENST00000333213 DERL3Q96Q80 235 aa20.26■□□□□ 0.83
TSEN54-201ENST00000333213 PPP1R3EQ9H7J1 279 aa20.26■□□□□ 0.83
TSEN54-201ENST00000333213 NOX4Q9NPH5 578 aa20.26■□□□□ 0.83
TSEN54-201ENST00000333213 SLC17A5Q9NRA2 495 aa20.26■□□□□ 0.83
TSEN54-201ENST00000333213 A0A0G2JNJ9 132 aa20.25■□□□□ 0.83
TSEN54-201ENST00000333213 M0R135 149 aa20.25■□□□□ 0.83
TSEN54-201ENST00000333213 GATBO75879 557 aaKnown RBP20.25■□□□□ 0.83
TSEN54-201ENST00000333213 ACSM4P0C7M7 580 aa20.25■□□□□ 0.83
TSEN54-201ENST00000333213 CD79AP11912 226 aa20.25■□□□□ 0.83
TSEN54-201ENST00000333213 HTR5AP47898 357 aa20.25■□□□□ 0.83
TSEN54-201ENST00000333213 CAV3P56539 151 aa20.25■□□□□ 0.83
TSEN54-201ENST00000333213 RAB1AP62820 205 aa20.25■□□□□ 0.83
TSEN54-201ENST00000333213 GABRA6Q16445 453 aa20.25■□□□□ 0.83
TSEN54-201ENST00000333213 EIF2S3LQ2VIR3 472 aaKnown RBP20.25■□□□□ 0.83
TSEN54-201ENST00000333213 PYDC2Q56P42 97 aa20.25■□□□□ 0.83
TSEN54-201ENST00000333213 MZT2AQ6P582 158 aa20.25■□□□□ 0.83
TSEN54-201ENST00000333213 ZNF584Q8IVC4 421 aa20.25■□□□□ 0.83
TSEN54-201ENST00000333213 DUSP18Q8NEJ0 188 aa20.25■□□□□ 0.83
TSEN54-201ENST00000333213 ZNF799Q96GE5 643 aa20.25■□□□□ 0.83
TSEN54-201ENST00000333213 SOX7Q9BT81 388 aa20.25■□□□□ 0.83
TSEN54-201ENST00000333213 Q9UFV3 132 aa20.25■□□□□ 0.83
TSEN54-201ENST00000333213 ADAM30Q9UKF2 790 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms