RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 TMEM100Q9NV29 134 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 PLEKHB1Q9UF11 243 aaPredicted RBP4.47□□□□□ -1.69
LRIT3-201ENST00000327908 PURGQ9UJV8 347 aaKnown RBP4.47□□□□□ -1.69
LRIT3-201ENST00000327908 GRIP1Q9Y3R0 1128 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 GTF3C1Q12789 2109 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 TRBV2A0A0J9YWF9 115 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 ZNF701M0R085 212 aaPredicted RBP4.47□□□□□ -1.69
LRIT3-201ENST00000327908 ABCD4O14678 606 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 NDUFA2O43678 99 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 ZNF780AO75290 641 aaPredicted RBP4.47□□□□□ -1.69
LRIT3-201ENST00000327908 SCG5P05408 212 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 CPEP16870 476 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 CDAP32320 146 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 POLR2IP36954 125 aaKnown RBP4.47□□□□□ -1.69
LRIT3-201ENST00000327908 SERPINF1P36955 418 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 CD200P41217 278 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 ZNF85Q03923 595 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 BSPH1Q075Z2 132 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 NKPD1Q17RQ9 610 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 LIPNQ5VXI9 398 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 PRSS57Q6UWY2 283 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 LINC00596Q86U02 117 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 COMMD2Q86X83 199 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 ZNF573Q86YE8 665 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 BBS1Q8NFJ9 593 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 OR5A2Q8NGI9 324 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 AKR7LQ8NHP1 331 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 DNAJA3Q96EY1 480 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 REEP6Q96HR9 211 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 C4orf36Q96KX1 117 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 ZNF75AQ96N20 296 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 PKIBQ9C010 78 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 FN3KRPQ9HA64 309 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 FAM206AQ9NX38 181 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 CRIM1Q9NZV1 1036 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 V9GYS6 101 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 SPTBN5Q9NRC6 3674 aaKnown RBP4.47□□□□□ -1.69
LRIT3-201ENST00000327908 SPTBN4Q9H254 2564 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 A0A1B0GWJ7 208 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 DEFB108AA8MXU0 73 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 F5H5K5 113 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 TPPPO94811 219 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 GYPBP06028 91 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 THBDP07204 575 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 MRPL3P09001 348 aaKnown RBP4.47□□□□□ -1.69
LRIT3-201ENST00000327908 APEX1P27695 318 aaKnown RBP4.47□□□□□ -1.69
LRIT3-201ENST00000327908 FUT6P51993 359 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 Q499Y3 187 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 C9orf135Q5VTT2 229 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 SHEQ5VZ18 495 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 GLT8D1Q68CQ7 371 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 CFAP77Q6ZQR2 320 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 MKXQ8IYA7 352 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 ZDHHC23Q8IYP9 409 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 MUC20Q8N307 709 aaPredicted RBP4.47□□□□□ -1.69
LRIT3-201ENST00000327908 OR8G5Q8NG78 346 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 PPP1R35Q8TAP8 253 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 C15orf40Q8WUR7 153 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 TSEN15Q8WW01 171 aaKnown RBP4.47□□□□□ -1.69
LRIT3-201ENST00000327908 MAP6Q96JE9 813 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 TSSK2Q96PF2 358 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 SIGLEC11Q96RL6 698 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 REPIN1Q9BWE0 567 aaKnown RBP4.47□□□□□ -1.69
LRIT3-201ENST00000327908 MRM2Q9UI43 246 aaKnown RBP4.47□□□□□ -1.69
LRIT3-201ENST00000327908 ADAM30Q9UKF2 790 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 MPDZO75970 2070 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 FUOMA2VDF0 154 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 DCTN6O00399 190 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 RER1O15258 196 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 BPNT1O95861 308 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 CLPTM1O96005 669 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 IGLV3-1P01715 115 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 EPHA2P29317 976 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 NTF4P34130 210 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 RPL5P46777 297 aaKnown RBP4.46□□□□□ -1.7
LRIT3-201ENST00000327908 GNG3P63215 75 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 SYT6Q5T7P8 510 aaPredicted RBP4.46□□□□□ -1.7
LRIT3-201ENST00000327908 DMKNQ6E0U4 476 aaPredicted RBP4.46□□□□□ -1.7
LRIT3-201ENST00000327908 FAM57BQ71RH2 274 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 GPR141Q7Z602 305 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 SERPINA12Q8IW75 414 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 ZNF420Q8TAQ5 688 aaPredicted RBP4.46□□□□□ -1.7
LRIT3-201ENST00000327908 PSMG3-AS1Q96PY0 264 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 DNTTIP1Q9H147 329 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 NOX3Q9HBY0 568 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 CISD1Q9NZ45 108 aaKnown RBP4.46□□□□□ -1.7
LRIT3-201ENST00000327908 ZNF224Q9NZL3 707 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 LPAR3Q9UBY5 353 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 PLEKHA6Q9Y2H5 1048 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 IGKV1D-43A0A0B4J1Z2 117 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 SMIM31A0A1B0GVY4 71 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 TRDV1A0A1B0GX56 115 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 DPRXA6NFQ7 191 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 PTGES3LE9PB15 166 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 XPNPEP2O43895 674 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 LIMS3P0CW19 117 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 LIMS4P0CW20 117 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 RAB3AP20336 220 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 GATA4P43694 442 aa4.46□□□□□ -1.7
LRIT3-201ENST00000327908 OR8G1Q15617 311 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms