RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 ISL2Q96A47 359 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 SLC35E1Q96K37 410 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 ARPC3O15145 178 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 MYOGP15173 224 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 HOXD9P28356 352 aaPredicted RBP7.21□□□□□ -1.26
CIITA-201ENST00000324288 BCL6P41182 706 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 PCBP4P57723 403 aaKnown RBP7.21□□□□□ -1.26
CIITA-201ENST00000324288 ZXDAP98168 799 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 DPY19L2P2Q6ZN68 376 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 C15orf39Q6ZRI6 1047 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 NAXDQ8IW45 347 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 THOC3Q96J01 351 aaKnown RBP7.21□□□□□ -1.26
CIITA-201ENST00000324288 PBX4Q9BYU1 374 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 ANKRD36CQ5JPF3 1778 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 CST7O76096 145 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 RGS11O94810 467 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 CT45A10P0DMU9 189 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 RPL12P30050 165 aaKnown RBP7.21□□□□□ -1.26
CIITA-201ENST00000324288 VEGFBP49765 207 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 NHLRC2Q8NBF2 726 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 FBXO4Q9UKT5 387 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 C5orf52A6NGY3 159 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 BCL2L11O43521 198 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 ORAI1Q96D31 301 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 STACQ99469 402 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 LRFN3Q9BTN0 628 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 AKIP1Q9NQ31 210 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 LHX3Q9UBR4 397 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 TCRBV16S1A1N1A0A5B0 115 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 M0R143 59 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 NHLH1Q02575 133 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 NHLH2Q02577 135 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 LILRA3Q8N6C8 439 aaPredicted RBP7.2□□□□□ -1.26
CIITA-201ENST00000324288 SLC38A9Q8NBW4 561 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 OR2G2Q8NGZ5 317 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 A4GALTQ9NPC4 353 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 GPR31O00270 319 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 ST8SIA3O43173 380 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 ERVFC1-1P60608 527 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 INPP5JQ15735 1006 aaPredicted RBP7.2□□□□□ -1.26
CIITA-201ENST00000324288 SLC38A6Q8IZM9 456 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 PHYHIPLQ96FC7 376 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 KCNG2Q9UJ96 466 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 MYO18BQ8IUG5 2567 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 MGMTP16455 207 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 CHRNA7P36544 502 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 KIR2DL3P43628 341 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 TMEM267Q0VDI3 215 aaPredicted RBP7.2□□□□□ -1.26
CIITA-201ENST00000324288 RHNO1Q9BSD3 238 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 A0A1W2PPE2 198 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 SLC5A10A0PJK1 596 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 TMEM221A6NGB7 291 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 SOD1P00441 154 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 OR4E1P0C645 316 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 CSN1S1P47710 185 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 FAM27D1Q5T7N8 215 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 LRP10Q7Z4F1 713 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 DDX60Q8IY21 1712 aaKnown RBP7.2□□□□□ -1.26
CIITA-201ENST00000324288 DTYMKP23919 212 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 OR2A2Q6IF42 318 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 PRSS35Q8N3Z0 413 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 IFI44Q8TCB0 444 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 ZFPM2Q8WW38 1151 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 SLCO4A1Q96BD0 722 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 CLSTN3Q9BQT9 956 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 PPT2Q9UMR5 302 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 SLC17A4Q9Y2C5 497 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 C4AP0C0L4 1744 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 C4BP0C0L5 1744 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 LOC107986453A0A1B0GWG9 222 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 PYCARD-AS1I3L0S3 204 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 FOXE1O00358 373 aaPredicted RBP7.2□□□□□ -1.26
CIITA-201ENST00000324288 ACOT8O14734 319 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 CTNSO60931 367 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 UBE3DQ7Z6J8 389 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 TRAV36DV7A0A075B6V5 113 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 NAT2P11245 290 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 B2MP61769 119 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 ZNF383Q8NA42 475 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 UBALD1Q8TB05 177 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 RBM14Q96PK6 669 aaKnown RBP7.2□□□□□ -1.26
CIITA-201ENST00000324288 PRDM7Q9NQW5 492 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 CLEC5AQ9NY25 188 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 PDCD11Q14690 1871 aaKnown RBP7.2□□□□□ -1.26
CIITA-201ENST00000324288 ZNF814B7Z6K7 855 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 DAOP14920 347 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 SYT14P1Q58G82 188 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 NHLRC1Q6VVB1 395 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 TMEM179BQ7Z7N9 219 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 ZNF429Q86V71 674 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 MFSD4AQ8N468 514 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 AGBL5Q8NDL9 886 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 LINC00052Q96N35 136 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 MS4A10Q96PG2 267 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 STRAPQ9Y3F4 350 aaKnown RBP7.2□□□□□ -1.26
CIITA-201ENST00000324288 TBPP20226 339 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 CLDN20P56880 219 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 CYHR1Q6ZMK1 362 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 NANOGP1Q8N7R0 232 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 M0QZQ0 153 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms