RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 TMEM104Q8NE00 496 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 FLVCR1-AS1Q8TAF5 88 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 SLC25A43Q8WUT9 341 aaPredicted RBP8.62□□□□□ -1.03
PTPRA-202ENST00000318266 SLC22A18Q96BI1 424 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 SMIM8Q96KF7 97 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 G6PC3Q9BUM1 346 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 NOSIPQ9Y314 301 aaKnown RBP8.62□□□□□ -1.03
PTPRA-202ENST00000318266 NPIPB9F8W1W9 429 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 C1QL1O75973 258 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 SCGB1D2O95969 90 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 RNF224P0DH78 156 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 AGAP20933 346 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 ITGA3P26006 1051 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 EIF2S3P41091 472 aaKnown RBP8.62□□□□□ -1.03
PTPRA-202ENST00000318266 CEBPGP53567 150 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 ACKR1Q16570 336 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 PDZD11Q5EBL8 140 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 NMES1Q9C002 83 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 BANF2Q9H503 90 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 C5orf66Q9H5L9 145 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 SLC5A6Q9Y289 635 aa8.62□□□□□ -1.03
PTPRA-202ENST00000318266 TMEM269A0A1B0GVZ9 245 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 NUDT19A8MXV4 375 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 GPR89AB7ZAQ6 455 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 FOXS1O43638 330 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 TSPAN15O95858 294 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 CD5P06127 495 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 GPR89BP0CG08 455 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 FOLR2P14207 255 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 CX3CR1P49238 355 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 PPM1FP49593 454 aaPredicted RBP8.61□□□□□ -1.03
PTPRA-202ENST00000318266 GSK3AP49840 483 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 CYCSP99999 105 aaKnown RBP8.61□□□□□ -1.03
PTPRA-202ENST00000318266 INSM1Q01101 510 aaPredicted RBP8.61□□□□□ -1.03
PTPRA-202ENST00000318266 RNF212Q495C1 297 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 MIDNQ504T8 468 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 PRSS54Q6PEW0 395 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 PNLDC1Q8NA58 520 aaKnown RBP8.61□□□□□ -1.03
PTPRA-202ENST00000318266 ASB17Q8WXJ9 295 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 HLA-CQ95604 372 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 TMEM230Q96A57 120 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 TMEM41AQ96HV5 264 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 LMF2Q9BU23 707 aaKnown RBP8.61□□□□□ -1.03
PTPRA-202ENST00000318266 GGACTQ9BVM4 153 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 SLC5A7Q9GZV3 580 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 SLC2A8Q9NY64 477 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 METTL1Q9UBP6 276 aaKnown RBP8.61□□□□□ -1.03
PTPRA-202ENST00000318266 COA3Q9Y2R0 106 aaPredicted RBP8.61□□□□□ -1.03
PTPRA-202ENST00000318266 HEBP2Q9Y5Z4 205 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 A0A1W2PP11 408 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 DBX1A6NMT0 343 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 MFNGO00587 321 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 HCRTR2O43614 444 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 ZNF354AO60765 605 aaPredicted RBP8.61□□□□□ -1.03
PTPRA-202ENST00000318266 OR13C7P0DN81 318 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 PRF1P14222 555 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 GLRA1P23415 457 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 GLP1RP43220 463 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 DVL1P1P54792 670 aaPredicted RBP8.61□□□□□ -1.03
PTPRA-202ENST00000318266 RAB2AP61019 212 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 FMODQ06828 376 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 TMEM128Q5BJH2 165 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 FAM78AQ5JUQ0 283 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 AWAT2Q6E213 333 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 KCTD18Q6PI47 426 aaPredicted RBP8.61□□□□□ -1.03
PTPRA-202ENST00000318266 CATSPERDQ86XM0 798 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 PMM1Q92871 262 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 ADOQ96SZ5 270 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 TCEAL7Q9BRU2 100 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 ST6GALNAC5Q9BVH7 336 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 RTN4RQ9BZR6 473 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 FOXQ1Q9C009 403 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 NRSN2Q9GZP1 204 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 FAM60AQ9NP50 221 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 HRASLS2Q9NWW9 162 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 FBXO7Q9Y3I1 522 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 REV3LO60673 3130 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 LDLRAD4O15165 306 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 MPIG6BO95866 241 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 CSTBP04080 98 aaKnown RBP8.61□□□□□ -1.03
PTPRA-202ENST00000318266 VSIG8P0DPA2 414 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 PNMTP11086 282 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 IGFBP3P17936 291 aaPredicted RBP8.61□□□□□ -1.03
PTPRA-202ENST00000318266 EMP2P54851 167 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 KIR2DS3Q14952 304 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 PNLIPRP3Q17RR3 467 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 C2orf27AQ580R0 203 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 DCXRQ7Z4W1 244 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 COMMD2Q86X83 199 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 ZNF321PQ8N8H1 164 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 MRPL43Q8N983 215 aaKnown RBP8.61□□□□□ -1.03
PTPRA-202ENST00000318266 TERB2Q8NHR7 220 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 SAT2Q96F10 170 aaPredicted RBP8.61□□□□□ -1.03
PTPRA-202ENST00000318266 JSRP1Q96MG2 331 aaPredicted RBP8.61□□□□□ -1.03
PTPRA-202ENST00000318266 DGAT2Q96PD7 388 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 OR10A5Q9H207 317 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 OR52A1Q9UKL2 312 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 LSM5Q9Y4Y9 91 aaKnown RBP8.61□□□□□ -1.03
PTPRA-202ENST00000318266 MMP24Q9Y5R2 645 aa8.61□□□□□ -1.03
PTPRA-202ENST00000318266 FLVCR1Q9Y5Y0 555 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms