RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 RNF167Q9H6Y7 350 aa13.3□□□□□ -0.28
PDLIM5-202ENST00000318007 NIPAL2Q9H841 368 aa13.3□□□□□ -0.28
PDLIM5-202ENST00000318007 LOC107986453A0A1B0GWG9 222 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 ACOD1A6NK06 481 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 OR4C45A6NMZ5 311 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 SMPD2O60906 423 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 ATE1O95260 518 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 GADD45AP24522 165 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 TGFBR2P37173 567 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 KIR2DL3P43628 341 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 TAS2R43P59537 309 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 SORDQ00796 357 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 ZNF92Q03936 586 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 OR1J1Q8NGS3 322 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 OR13F1Q8NGS4 319 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 TSEN15Q8WW01 171 aaKnown RBP13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 PIK3IP1Q96FE7 263 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 TRMT61AQ96FX7 289 aaKnown RBP13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 REEP6Q96HR9 211 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 LYZL4Q96KX0 146 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 OR14A2Q96R54 314 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 CHCHD6Q9BRQ6 235 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 FUNDC2Q9BWH2 189 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 OR2J1Q9GZK6 312 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 CRNNQ9UBG3 495 aaPredicted RBP13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 EIF3KQ9UBQ5 218 aaKnown RBP13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 TACC2O95359 2948 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 ROS1P08922 2347 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 CASKO14936 926 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 SIAH2O43255 324 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 PLPP2O43688 288 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 COX5BP10606 129 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 ZNF35P13682 527 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 JUNBP17275 347 aaPredicted RBP13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 ALDH3B2P48448 385 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 TGM4P49221 684 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 UCP2P55851 309 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 SNTB2Q13425 540 aaKnown RBP13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 KRTAP27-1Q3LI81 207 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 CCDC58Q4VC31 144 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 CLVS1Q8IUQ0 354 aaPredicted RBP13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 NEUROG1Q92886 237 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 HS3ST6Q96QI5 342 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 OR10A2Q9H208 303 aa13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 NUFIP1Q9UHK0 495 aaKnown RBP13.29□□□□□ -0.28
PDLIM5-202ENST00000318007 NBPF19A0A087WUL8 3843 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 DPPA5A6NC42 116 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 H3BSA7 217 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 OGG1O15527 345 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 SYT7O43581 403 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 PLAUP00749 431 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 OCM2P0CE71 109 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 PPP3CBP16298 524 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 DCTDP32321 178 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 FABP6P51161 128 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 FABP5Q01469 135 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 ACSM1Q08AH1 577 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 ALKBH6Q3KRA9 238 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 ELMOD2Q8IZ81 293 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 KBTBD8Q8NFY9 601 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 SGK3Q96BR1 496 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 C1QTNF5Q9BXJ0 243 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 NDUFB11Q9NX14 153 aa13.28□□□□□ -0.28
PDLIM5-202ENST00000318007 SMIM30A4D0T7 59 aa13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 WIPF3A6NGB9 483 aa13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 TMEM212A6NML5 194 aa13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 CLDN1O95832 211 aa13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 APOC1P02654 83 aa13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 PPP1CBP62140 327 aa13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 BDH1Q02338 343 aa13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 TPBGQ13641 420 aa13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 GK2Q14410 553 aaPredicted RBP13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 ZNF544Q6NX49 715 aa13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 MEX3BQ6ZN04 569 aaKnown RBP13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 OR5AS1Q8N127 324 aa13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 OR1J2Q8NGS2 313 aa13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 OR13C3Q8NGS6 347 aa13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 SLC25A40Q8TBP6 338 aa13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 APOBEC3DQ96AK3 386 aaPredicted RBP13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 ESRP2Q9H6T0 727 aaKnown RBP13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 ATPIF1Q9UII2 106 aa13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 ZNF281Q9Y2X9 895 aa13.27□□□□□ -0.28
PDLIM5-202ENST00000318007 CELSR2Q9HCU4 2923 aa13.27□□□□□ -0.29
PDLIM5-202ENST00000318007 COL8A1P27658 744 aa13.27□□□□□ -0.29
PDLIM5-202ENST00000318007 OR52H1Q8NGJ2 320 aa13.27□□□□□ -0.29
PDLIM5-202ENST00000318007 NKX3-1Q99801 234 aaPredicted RBP13.27□□□□□ -0.29
PDLIM5-202ENST00000318007 PPP1R3EQ9H7J1 279 aa13.27□□□□□ -0.29
PDLIM5-202ENST00000318007 MOB1AQ9H8S9 216 aa13.27□□□□□ -0.29
PDLIM5-202ENST00000318007 CENPEQ02224 2701 aa13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 A0A1B0GVI7 797 aa13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 PTAFRP25105 342 aa13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 PSMA1P25786 263 aaKnown RBP13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 GABRA5P31644 462 aa13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 MPV17P39210 176 aa13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 RPS11P62280 158 aaKnown RBP eCLIP13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 C22orf42Q6IC83 251 aa13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 PGAP1Q75T13 922 aa13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 MRPL21Q7Z2W9 205 aaKnown RBP13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 DVL3Q92997 716 aaPredicted RBP13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 TMEM106AQ96A25 262 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms