RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 MYF5P13349 255 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 SKP1P63208 163 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 PPP1R1AQ13522 171 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 ISXQ2M1V0 245 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 C2orf76Q3KRA6 126 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 C16orf47Q6ZP98 133 aaPredicted RBP13.92□□□□□ -0.18
UBAP1-201ENST00000297661 MAML2Q8IZL2 1156 aaPredicted RBP13.92□□□□□ -0.18
UBAP1-201ENST00000297661 OR11A1Q9GZK7 315 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 COMMD4Q9H0A8 199 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 CYTL1Q9NRR1 136 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 LANCL2Q9NS86 450 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 VSIG4Q9Y279 399 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 CSAG2Q9Y5P2 127 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 CABIN1Q9Y6J0 2220 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 C2orf72A6NCS6 295 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 GUSBP08236 651 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 ZNF28P17035 718 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 HLA-GP17693 338 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 ZBTB25P24278 435 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 CXCR1P25024 350 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 GABRA4P48169 554 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 NAAAQ02083 359 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 HGFACQ04756 655 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 LPAL2Q16609 132 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 DRAM2Q6UX65 266 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 LYG2Q86SG7 212 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 C1orf210Q8IVY1 113 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 ZNF440Q8IYI8 595 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 ZNF417Q8TAU3 575 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 MESP1Q9BRJ9 268 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 NUDT9Q9BW91 350 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 ZMAT3Q9HA38 289 aaKnown RBP13.92□□□□□ -0.18
UBAP1-201ENST00000297661 RPS10P5Q9NQ39 176 aa13.92□□□□□ -0.18
UBAP1-201ENST00000297661 LOC100509620A0A075B734 347 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 LAMTOR5O43504 91 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 SLC16A7O60669 478 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 RNF224P0DH78 156 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 C1orf189Q5VU69 101 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 KCTD9Q7L273 389 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 GPR148Q8TDV2 347 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 FAM3DQ96BQ1 224 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 SLC6A7Q99884 636 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 MICU1Q9BPX6 476 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 GGACTQ9BVM4 153 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 A6NLC8 198 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 ZNF736B4DX44 427 aaPredicted RBP13.91□□□□□ -0.18
UBAP1-201ENST00000297661 K7ESF4 209 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 LY86O95711 162 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 PSMB6P28072 239 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 PPICP45877 212 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 MFGE8Q08431 387 aaPredicted RBP13.91□□□□□ -0.18
UBAP1-201ENST00000297661 NKPD1Q17RQ9 610 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 EEF1A1P5Q5VTE0 462 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 ZNF627Q7L945 461 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 CASTOR1Q8WTX7 329 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 METTL21AQ8WXB1 218 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 CST11Q9H112 138 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 TMPRSS5Q9H3S3 457 aa13.91□□□□□ -0.18
UBAP1-201ENST00000297661 CHMP1AQ9HD42 196 aaPredicted RBP13.91□□□□□ -0.18
UBAP1-201ENST00000297661 A0A1W2PPC4 97 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 C9JQL5 133 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 XKRYO14609 159 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 AGPAT2O15120 278 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 CYB5AP00167 134 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 IL12BP29460 328 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 CD80P33681 288 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 IL13RA1P78552 427 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 DEFA6Q01524 100 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 BIKQ13323 160 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 ACKR1Q16570 336 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 KRBOX4Q5JUW0 171 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.9□□□□□ -0.18
UBAP1-201ENST00000297661 ASPHD2Q6ICH7 369 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 DTWD2Q8NBA8 298 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 SLC39A7Q92504 469 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 ISOC2Q96AB3 205 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 RRNAD1Q96FB5 475 aaKnown RBP13.9□□□□□ -0.18
UBAP1-201ENST00000297661 C4orf45Q96LM5 186 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 PHB2Q99623 299 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 PDE7BQ9NP56 450 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 TMEM131Q92545 1883 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 CNTRLQ7Z7A1 2325 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 TRBV5-7A0A0A0MS05 114 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 TMEM150CB9EJG8 249 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 CRHP06850 196 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 IL11P20809 199 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 BLKP51451 505 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 FAM76BQ5HYJ3 339 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 TMEM244Q5VVB8 128 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 DHRS11Q6UWP2 260 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 MITD1Q8WV92 249 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 LRFN3Q9BTN0 628 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 TREM2Q9NZC2 230 aa13.9□□□□□ -0.18
UBAP1-201ENST00000297661 RIF1Q5UIP0 2472 aaKnown RBP13.9□□□□□ -0.18
UBAP1-201ENST00000297661 SPAG17Q6Q759 2223 aa13.89□□□□□ -0.19
UBAP1-201ENST00000297661 LOC100289279A0A1B0GTE1 492 aa13.89□□□□□ -0.19
UBAP1-201ENST00000297661 C13orf42A0A1B0GVH6 325 aa13.89□□□□□ -0.19
UBAP1-201ENST00000297661 C9orf170A2RU37 121 aa13.89□□□□□ -0.19
UBAP1-201ENST00000297661 C5orf51A6NDU8 294 aa13.89□□□□□ -0.19
UBAP1-201ENST00000297661 DDAH2O95865 285 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms