RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 ACTR6Q9GZN1 396 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 GPR173Q9NS66 373 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 GLTPQ9NZD2 209 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 GSKIPQ9P0R6 139 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 TCFL5Q9UL49 500 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 I3L521 148 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 CSTBP04080 98 aaKnown RBP8.24□□□□□ -1.09
PRDM9-201ENST00000296682 OR3A4PP47883 348 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF84P51523 738 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 MAP2K6P52564 334 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 SORDQ00796 357 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 SPEM2Q0P670 501 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 ACER2Q5QJU3 275 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 METTL11BQ5VVY1 283 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 FAM198BQ6UWH4 519 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 ALKAL2Q6UX46 152 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 BAIAP2L2Q6UXY1 529 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 FJX1Q86VR8 437 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 MCEMP1Q8IX19 187 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 GALNT16Q8N428 558 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 NOXO1Q8NFA2 376 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 OR6M1Q8NGM8 313 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 NEK7Q8TDX7 302 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 SORCS2Q96PQ0 1159 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 NAA11Q9BSU3 229 aaPredicted RBP8.24□□□□□ -1.09
PRDM9-201ENST00000296682 POFUT1Q9H488 388 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 SCP2D1Q9UJQ7 156 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 EML6Q6ZMW3 1958 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 MEGF11A6BM72 1044 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 ETV2O00321 342 aaPredicted RBP8.24□□□□□ -1.09
PRDM9-201ENST00000296682 HSPB6O14558 160 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF780AO75290 641 aaPredicted RBP8.24□□□□□ -1.09
PRDM9-201ENST00000296682 KLF7O75840 302 aaPredicted RBP8.24□□□□□ -1.09
PRDM9-201ENST00000296682 SPDEFO95238 335 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 EIF1P41567 113 aaKnown RBP8.24□□□□□ -1.09
PRDM9-201ENST00000296682 NDUFA5Q16718 116 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 NLRC3Q7RTR2 1065 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 TIPARPQ7Z3E1 657 aaKnown RBP8.24□□□□□ -1.09
PRDM9-201ENST00000296682 GABRG1Q8N1C3 465 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 OR8B12Q8NGG6 310 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 ABHD3Q8WU67 409 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 CT55Q8WUE5 264 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF436Q9C0F3 470 aaPredicted RBP8.24□□□□□ -1.09
PRDM9-201ENST00000296682 RANBP3Q9H6Z4 567 aaPredicted RBP8.24□□□□□ -1.09
PRDM9-201ENST00000296682 C12orf49Q9H741 205 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF319Q9P2F9 582 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 NXT1Q9UKK6 140 aaKnown RBP8.24□□□□□ -1.09
PRDM9-201ENST00000296682 CHCHD2Q9Y6H1 151 aaPredicted RBP8.24□□□□□ -1.09
PRDM9-201ENST00000296682 IGHV1-45A0A0A0MS14 117 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 TRBV5-5A0A0J9YX44 114 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 LNP1A1A4G5 178 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 KCNAB3O43448 404 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 CD79AP11912 226 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 HTR5AP47898 357 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 NPY4RP50391 375 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 MECP2P51608 486 aaKnown RBP8.23□□□□□ -1.09
PRDM9-201ENST00000296682 CLDN15P56746 228 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 BTG1P62324 171 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 GRK1Q15835 563 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 EXT1Q16394 746 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 ANKRD16Q6P6B7 361 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 C5orf46Q6UWT4 87 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 TMPRSS7Q7RTY8 843 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 ADGRE4PQ86SQ3 457 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 PNLDC1Q8NA58 520 aaKnown RBP8.23□□□□□ -1.09
PRDM9-201ENST00000296682 TMEM104Q8NE00 496 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 ZFAND1Q8TCF1 268 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 PIGCQ92535 297 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 POTEKPQ9BYX7 375 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 DEFB127Q9H1M4 99 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 GHITMQ9H3K2 345 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF224Q9NZL3 707 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 COMMD9Q9P000 198 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 B3GAT1Q9P2W7 334 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 PIGLQ9Y2B2 252 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 LHFPL6Q9Y693 200 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 TTLL8A6PVC2 850 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 HSPB2A8KAH6 182 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 HLA-AP01891 365 aaKnown RBP8.23□□□□□ -1.09
PRDM9-201ENST00000296682 UBCP0CG48 685 aaKnown RBP8.23□□□□□ -1.09
PRDM9-201ENST00000296682 COX6A1P12074 109 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 RAG2P55895 527 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 SIGLEC14Q08ET2 396 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 SLC9A3R2Q15599 337 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 HSPB2Q16082 182 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 MRPL14Q6P1L8 145 aaKnown RBP8.23□□□□□ -1.09
PRDM9-201ENST00000296682 BPHLQ86WA6 291 aaPredicted RBP8.23□□□□□ -1.09
PRDM9-201ENST00000296682 FAM109AQ8N4B1 249 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 ST7LQ8TDW4 575 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 NARS2Q96I59 477 aaKnown RBP8.23□□□□□ -1.09
PRDM9-201ENST00000296682 C1QTNF6Q9BXI9 259 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 ACKR4Q9NPB9 350 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 FANCFQ9NPI8 374 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 NCOA6Q14686 2063 aaPredicted RBP8.23□□□□□ -1.09
PRDM9-201ENST00000296682 A0A1W2PPC1 479 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 TMEM82A0PJX8 343 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 TNFSF15O95150 251 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 IGHMP01871 453 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 CSF1P09603 554 aa8.23□□□□□ -1.09
PRDM9-201ENST00000296682 ACHEP22303 614 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms