RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.56□□□□□ -1.52
CD44-204ENST00000279452 TMEM269A0A1B0GVZ9 245 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 A0A1W2PQL4 384 aaPredicted RBP5.56□□□□□ -1.52
CD44-204ENST00000279452 DAPL1A0PJW8 107 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 ANKRD30BLA7E2S9 258 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 CD300LBA8K4G0 201 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 IQCF6A8MYZ5 107 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 CLDN25C9JDP6 229 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 LOC110117498-PIK3R3F6TDL0 507 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 MAGEB4O15481 346 aaPredicted RBP5.56□□□□□ -1.52
CD44-204ENST00000279452 LILRA1O75019 489 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 CLIC3O95833 236 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 HLA-DPB1P04440 258 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 TNFRSF1AP19438 455 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 ALOX5APP20292 161 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 KITLGP21583 273 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 ACHEP22303 614 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 USF1P22415 310 aaPredicted RBP5.56□□□□□ -1.52
CD44-204ENST00000279452 CA6P23280 308 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 ANOS1P23352 680 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 CFL1P23528 166 aaKnown RBP5.56□□□□□ -1.52
CD44-204ENST00000279452 COL8A2P25067 703 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 OTX1P32242 354 aaPredicted RBP5.56□□□□□ -1.52
CD44-204ENST00000279452 GNALP38405 381 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 NR4A2P43354 598 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 SRP9P49458 86 aaKnown RBP5.56□□□□□ -1.52
CD44-204ENST00000279452 SNRPGP62308 76 aaKnown RBP5.56□□□□□ -1.52
CD44-204ENST00000279452 ACTC1P68032 377 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 ACTA1P68133 377 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 MVKQ03426 396 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 ZNF91Q05481 1191 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 SLC34A1Q06495 639 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 OR8G1Q15617 311 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 ODF4Q2M2E3 257 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 RSPO1Q2MKA7 263 aaPredicted RBP5.56□□□□□ -1.52
CD44-204ENST00000279452 KRTAP27-1Q3LI81 207 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 FAM209AQ5JX71 171 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 AVPI1Q5T686 147 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 BCL2L15Q5TBC7 163 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 COLCA1Q6ZS62 124 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 PEG10Q86TG7 708 aaKnown RBP5.56□□□□□ -1.52
CD44-204ENST00000279452 ENTHD1Q8IYW4 607 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 ZNF679Q8IYX0 411 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 ZNF786Q8N393 782 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 DHRSXQ8N5I4 330 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 PACRGLQ8N7B6 248 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 ZNF540Q8NDQ6 660 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 SETD9Q8NE22 299 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 OR8G5Q8NG78 346 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 OR52H1Q8NGJ2 320 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 OR13G1Q8NGZ3 307 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 OR8S1Q8NH09 359 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 ITLN1Q8WWA0 313 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 YIPF5Q969M3 257 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 TIMD4Q96H15 378 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 FAM71F1Q96KD3 344 aaPredicted RBP5.56□□□□□ -1.52
CD44-204ENST00000279452 COX4I2Q96KJ9 171 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 RDH12Q96NR8 316 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 OR2V2Q96R30 315 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 OR8B4Q96RC9 309 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 TMUB1Q9BVT8 246 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 PAPOLGQ9BWT3 736 aaKnown RBP5.56□□□□□ -1.52
CD44-204ENST00000279452 GSX1Q9H4S2 264 aaPredicted RBP5.56□□□□□ -1.52
CD44-204ENST00000279452 NIPAL2Q9H841 368 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 CHODLQ9H9P2 273 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 AMBNQ9NP70 447 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 ZNF275Q9NSD4 429 aaPredicted RBP5.56□□□□□ -1.52
CD44-204ENST00000279452 TMEM100Q9NV29 134 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 GNG8Q9UK08 70 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 CACNG2Q9Y698 323 aa5.56□□□□□ -1.52
CD44-204ENST00000279452 CSMD2Q7Z408 3487 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 LRP5LA4QPB2 252 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 A6NLC8 198 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 PRR32B1ATL7 298 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 F5H5P2 479 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 H0YL77 283 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 H3BSH0 61 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 ZNF254O75437 659 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 HEXAP06865 529 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 OR2T7P0C7T2 308 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 DBTP11182 482 aaKnown RBP5.55□□□□□ -1.52
CD44-204ENST00000279452 IRF2P14316 349 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 FOSL1P15407 271 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 ZNF16P17020 682 aaPredicted RBP5.55□□□□□ -1.52
CD44-204ENST00000279452 CAPGP40121 348 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 CHN2P52757 468 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 EFNB1P98172 346 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 EGR3Q06889 387 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 SLC3A1Q07837 685 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 MFGE8Q08431 387 aaPredicted RBP5.55□□□□□ -1.52
CD44-204ENST00000279452 HNRNPA0Q13151 305 aaKnown RBP5.55□□□□□ -1.52
CD44-204ENST00000279452 CDK5R2Q13319 367 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 TMED1Q13445 227 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 OCLNQ16625 522 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 TP53I3Q53FA7 332 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 OGFRL1Q5TC84 451 aaPredicted RBP5.55□□□□□ -1.52
CD44-204ENST00000279452 TTC23Q5W5X9 447 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 Q6ZR03 302 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 KCTD8Q6ZWB6 473 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 RHOUQ7L0Q8 258 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms