RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 ZNF248Q8NDW4 579 aa24.45■■□□□ 1.5
CBX4-201ENST00000269397 SOX7Q9BT81 388 aa24.45■■□□□ 1.5
CBX4-201ENST00000269397 DZANK1Q9NVP4 752 aa24.45■■□□□ 1.5
CBX4-201ENST00000269397 NPIPA5E9PKD4 350 aa24.45■■□□□ 1.5
CBX4-201ENST00000269397 MS4A18H0YCH9 400 aa24.45■■□□□ 1.5
CBX4-201ENST00000269397 FAM157CP0CG43 387 aa24.45■■□□□ 1.5
CBX4-201ENST00000269397 SPP1P10451 314 aa24.45■■□□□ 1.5
CBX4-201ENST00000269397 MPZP25189 248 aa24.45■■□□□ 1.5
CBX4-201ENST00000269397 POU3F1Q03052 451 aaPredicted RBP24.45■■□□□ 1.5
CBX4-201ENST00000269397 MS4A18Q3C1V0 323 aa24.45■■□□□ 1.5
CBX4-201ENST00000269397 DHRS7BQ6IAN0 325 aaPredicted RBP24.45■■□□□ 1.5
CBX4-201ENST00000269397 FAHD2BQ6P2I3 314 aaPredicted RBP24.45■■□□□ 1.5
CBX4-201ENST00000269397 HOGA1Q86XE5 327 aa24.45■■□□□ 1.5
CBX4-201ENST00000269397 FAHD2AQ96GK7 314 aa24.45■■□□□ 1.5
CBX4-201ENST00000269397 BANF2Q9H503 90 aa24.45■■□□□ 1.5
CBX4-201ENST00000269397 UQCC1Q9NVA1 299 aa24.45■■□□□ 1.5
CBX4-201ENST00000269397 NPIPA1Q9UND3 350 aa24.45■■□□□ 1.5
CBX4-201ENST00000269397 A0A1W2PP11 408 aa24.44■■□□□ 1.5
CBX4-201ENST00000269397 MST1LQ2TV78 715 aa24.44■■□□□ 1.5
CBX4-201ENST00000269397 C5orf66Q9H5L9 145 aa24.44■■□□□ 1.5
CBX4-201ENST00000269397 A0A0A6YYD4 124 aa24.44■■□□□ 1.5
CBX4-201ENST00000269397 SOCS1O15524 211 aa24.44■■□□□ 1.5
CBX4-201ENST00000269397 OR51F2Q8NH61 342 aa24.44■■□□□ 1.5
CBX4-201ENST00000269397 TMEM230Q96A57 120 aa24.44■■□□□ 1.5
CBX4-201ENST00000269397 USB1Q9BQ65 265 aaKnown RBP24.44■■□□□ 1.5
CBX4-201ENST00000269397 SLC7A5P2Q9GIP4 190 aa24.44■■□□□ 1.5
CBX4-201ENST00000269397 FAM206AQ9NX38 181 aa24.44■■□□□ 1.5
CBX4-201ENST00000269397 PIAS3Q9Y6X2 628 aa24.44■■□□□ 1.5
CBX4-201ENST00000269397 BCKDHBP21953 392 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 HSD11B1P28845 292 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 RFC3P40938 356 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 NSDHLQ15738 373 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 GRINAQ7Z429 371 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 TMEM41AQ96HV5 264 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 NUDT22Q9BRQ3 303 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 CARHSP1Q9Y2V2 147 aaKnown RBP24.43■■□□□ 1.5
CBX4-201ENST00000269397 ARPC4-TTLL3A0A0A6YYG9 625 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 MPIG6BO95866 241 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 CRYBA1P05813 215 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 SLC2A1P11166 492 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 DCDP81605 110 aaKnown RBP24.43■■□□□ 1.5
CBX4-201ENST00000269397 COL13A1Q5TAT6 717 aaPredicted RBP24.43■■□□□ 1.5
CBX4-201ENST00000269397 TERB2Q8NHR7 220 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 ASB10Q8WXI3 467 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 NMES1Q9C002 83 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 WWTR1Q9GZV5 400 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 PBOV1Q9GZY1 135 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 DUSP15Q9H1R2 295 aaPredicted RBP24.43■■□□□ 1.5
CBX4-201ENST00000269397 PDE7BQ9NP56 450 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 CUTCQ9NTM9 273 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 CFAP54Q96N23 3096 aa24.43■■□□□ 1.5
CBX4-201ENST00000269397 AGPAT2O15120 278 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 BPNT1O95861 308 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 ABOP16442 354 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 ZNF93P35789 620 aaPredicted RBP24.42■■□□□ 1.5
CBX4-201ENST00000269397 GFOD2Q3B7J2 385 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 PLAC9Q5JTB6 97 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 CLEC18BQ6UXF7 455 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 FOXRED2Q8IWF2 684 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 SLAMF6Q96DU3 332 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 ZNF285Q96NJ3 590 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 ASXL3Q9C0F0 2248 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 EPOPA6NHQ4 379 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 IGHMP01871 453 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 CLDN6P56747 220 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 PDZK1IP1Q13113 114 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 AKIRIN2Q53H80 203 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 TMEM128Q5BJH2 165 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 C10orf91Q5T1B1 145 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 COMMD2Q86X83 199 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 OR51E1Q8TCB6 317 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 RXFP4Q8TDU9 374 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 OIT3Q8WWZ8 545 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 MMP26Q9NRE1 261 aa24.42■■□□□ 1.5
CBX4-201ENST00000269397 SDK1Q7Z5N4 2213 aa24.41■■□□□ 1.5
CBX4-201ENST00000269397 SNAPINO95295 136 aa24.41■■□□□ 1.5
CBX4-201ENST00000269397 WDR87Q6ZQQ6 2873 aa24.41■■□□□ 1.5
CBX4-201ENST00000269397 TRBV6-7A0A0A0MS04 114 aa24.41■■□□□ 1.5
CBX4-201ENST00000269397 FTCDNL1E5RQL4 147 aa24.41■■□□□ 1.5
CBX4-201ENST00000269397 HTR3BO95264 441 aa24.41■■□□□ 1.5
CBX4-201ENST00000269397 MUC1P15941 1255 aaPredicted RBP24.41■■□□□ 1.5
CBX4-201ENST00000269397 ANOS1P23352 680 aa24.41■■□□□ 1.5
CBX4-201ENST00000269397 CX3CR1P49238 355 aa24.41■■□□□ 1.5
CBX4-201ENST00000269397 MMP16P51512 607 aa24.41■■□□□ 1.5
CBX4-201ENST00000269397 GLIPR1L1Q6UWM5 242 aa24.41■■□□□ 1.5
CBX4-201ENST00000269397 SHISA6Q6ZSJ9 500 aa24.41■■□□□ 1.5
CBX4-201ENST00000269397 DTWD2Q8NBA8 298 aa24.41■■□□□ 1.5
CBX4-201ENST00000269397 RNF133Q8WVZ7 376 aa24.41■■□□□ 1.5
CBX4-201ENST00000269397 C11orf40Q8WZ69 217 aa24.41■■□□□ 1.5
CBX4-201ENST00000269397 OR10C1Q96KK4 312 aa24.41■■□□□ 1.5
CBX4-201ENST00000269397 COA4Q9NYJ1 87 aa24.41■■□□□ 1.5
CBX4-201ENST00000269397 GSKIPQ9P0R6 139 aa24.41■■□□□ 1.5
CBX4-201ENST00000269397 SHISA8B8ZZ34 492 aa24.4■■□□□ 1.5
CBX4-201ENST00000269397 ZNF354AO60765 605 aaPredicted RBP24.4■■□□□ 1.5
CBX4-201ENST00000269397 LPAR5Q9H1C0 372 aa24.4■■□□□ 1.5
CBX4-201ENST00000269397 ACKR4Q9NPB9 350 aa24.4■■□□□ 1.5
CBX4-201ENST00000269397 VDAC3Q9Y277 283 aa24.4■■□□□ 1.5
CBX4-201ENST00000269397 IGKV3D-11A0A0A0MRZ8 115 aa24.4■■□□□ 1.5
CBX4-201ENST00000269397 PJVKQ0ZLH3 352 aa24.4■■□□□ 1.5
CBX4-201ENST00000269397 ANKRD55Q3KP44 614 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms