RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 NUP210LQ5VU65 1888 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 A0A1W2PP11 408 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 CPED1A4D0V7 1026 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 FADS1O60427 444 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 ZNF354AO60765 605 aaPredicted RBP8.95□□□□□ -0.98
LIG3-201ENST00000262327 STK17BO94768 372 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 PDGFBP01127 241 aaPredicted RBP8.95□□□□□ -0.98
LIG3-201ENST00000262327 IGFBP3P17936 291 aaPredicted RBP8.95□□□□□ -0.98
LIG3-201ENST00000262327 KCNJ3P48549 501 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 PRKXP51817 358 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 AFF3P51826 1226 aaKnown RBP8.95□□□□□ -0.98
LIG3-201ENST00000262327 SRSF3P84103 164 aaKnown RBP8.95□□□□□ -0.98
LIG3-201ENST00000262327 PAQR4Q8N4S7 273 aaPredicted RBP8.95□□□□□ -0.98
LIG3-201ENST00000262327 SLC26A10Q8NG04 563 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 MARCH1Q8TCQ1 289 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 PAQR8Q8TEZ7 354 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 SLC25A21Q9BQT8 299 aaPredicted RBP8.95□□□□□ -0.98
LIG3-201ENST00000262327 MIOXQ9UGB7 285 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 PCDHB10Q9UN67 800 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 R4GMQ9 66 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 RAB27BO00194 218 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 BCAT2O15382 392 aaPredicted RBP8.95□□□□□ -0.98
LIG3-201ENST00000262327 H2BFMP0C1H6 154 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 UBBP0CG47 229 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 UBCP0CG48 685 aaKnown RBP8.95□□□□□ -0.98
LIG3-201ENST00000262327 PGAM2P15259 253 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 BDKRB2P30411 391 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 NUBP1P53384 320 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 OR1D5P58170 312 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 HNRNPKP61978 463 aaKnown RBP eCLIP8.95□□□□□ -0.98
LIG3-201ENST00000262327 RPS27AP62979 156 aaKnown RBP8.95□□□□□ -0.98
LIG3-201ENST00000262327 UBA52P62987 128 aaKnown RBP8.95□□□□□ -0.98
LIG3-201ENST00000262327 TMEM200AQ86VY9 491 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 ARMC10Q8N2F6 343 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 C2CD4CQ8TF44 421 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 MAFIPQ8WZ33 124 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 C5orf34Q96MH7 638 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 WWTR1Q9GZV5 400 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 BANF2Q9H503 90 aa8.95□□□□□ -0.98
LIG3-201ENST00000262327 BARX1Q9HBU1 254 aaPredicted RBP8.95□□□□□ -0.98
LIG3-201ENST00000262327 FREM2Q5SZK8 3169 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 A0A0B4J2A0 478 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 C9orf170A2RU37 121 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 OR14I1A6ND48 311 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 MPTX1A8MV57 137 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 A8MVM7 634 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 NPIPA5E9PKD4 350 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 TMEM127O75204 238 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 ABOP16442 354 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 CNR1P21554 472 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 SLC6A8P48029 635 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 ARL4DP49703 201 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 SCAND1P57086 179 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 FBXW4P57775 412 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 ROM1Q03395 351 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 SLC9A3R2Q15599 337 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 RSPO4Q2I0M5 234 aaPredicted RBP8.94□□□□□ -0.98
LIG3-201ENST00000262327 ZNF528Q3MIS6 628 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 CARD17Q5XLA6 110 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 FDX2Q6P4F2 183 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 RBMS3Q6XE24 437 aaKnown RBP8.94□□□□□ -0.98
LIG3-201ENST00000262327 ZNF101Q8IZC7 436 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 KCNRGQ8N5I3 272 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 ALX4Q9H161 411 aaPredicted RBP8.94□□□□□ -0.98
LIG3-201ENST00000262327 SLC25A32Q9H2D1 315 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 SEC61A2Q9H9S3 476 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 UCK1Q9HA47 277 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 FN3KRPQ9HA64 309 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 SHPKQ9UHJ6 478 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 NPIPA1Q9UND3 350 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 SDK2Q58EX2 2172 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 A0A0D9SG52 128 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 A0A1B0GTI1 187 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 DISC1C4P0D8 188 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 ALG1L2C9J202 215 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 MS4A18H0YCH9 400 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 M0R296 226 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 TSPAN2O60636 221 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 DXOO77932 396 aaKnown RBP8.94□□□□□ -0.98
LIG3-201ENST00000262327 ZBTB25P24278 435 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 CDAP32320 146 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 CASRP41180 1078 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 POLR2HP52434 150 aaKnown RBP8.94□□□□□ -0.98
LIG3-201ENST00000262327 SLC26A5P58743 744 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 PPIAP62937 165 aaKnown RBP8.94□□□□□ -0.98
LIG3-201ENST00000262327 FOXK1P85037 733 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 GUCA2BQ16661 112 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 MS4A18Q3C1V0 323 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 RAB12Q6IQ22 244 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 C1orf210Q8IVY1 113 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 FOXRED2Q8IWF2 684 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 CCNL2Q96S94 520 aaPredicted RBP8.94□□□□□ -0.98
LIG3-201ENST00000262327 CMSS1Q9BQ75 279 aaKnown RBP8.94□□□□□ -0.98
LIG3-201ENST00000262327 VSX1Q9NZR4 365 aaPredicted RBP8.94□□□□□ -0.98
LIG3-201ENST00000262327 DMDP11532 3685 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 STMND1H3BQB6 276 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 LDLRAD4O15165 306 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 BCL2L11O43521 198 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 ADAP1O75689 374 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 KLK3P07288 261 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms