RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 RYDENQ9NUL5 291 aaKnown RBP12.21□□□□□ -0.45
PDGFRB-201ENST00000261799 LAMP3Q9UQV4 416 aa12.21□□□□□ -0.45
PDGFRB-201ENST00000261799 PTTG1O95997 202 aa12.21□□□□□ -0.45
PDGFRB-201ENST00000261799 Q6ZPB1 254 aaPredicted RBP12.21□□□□□ -0.45
PDGFRB-201ENST00000261799 SLC25A26Q70HW3 274 aa12.21□□□□□ -0.45
PDGFRB-201ENST00000261799 SFTPA1Q8IWL2 248 aa12.21□□□□□ -0.45
PDGFRB-201ENST00000261799 TMEM104Q8NE00 496 aa12.21□□□□□ -0.45
PDGFRB-201ENST00000261799 DHRS9Q9BPW9 319 aa12.21□□□□□ -0.45
PDGFRB-201ENST00000261799 PIMREGQ9BSJ6 248 aa12.21□□□□□ -0.45
PDGFRB-201ENST00000261799 NMES1Q9C002 83 aa12.21□□□□□ -0.45
PDGFRB-201ENST00000261799 LOXHD1Q8IVV2 1947 aa12.21□□□□□ -0.45
PDGFRB-201ENST00000261799 TRAF3IP2O43734 574 aaPredicted RBP12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 HOXC8P31273 242 aa12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 MNX1P50219 401 aaPredicted RBP12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 UBE2G1P62253 170 aa12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 PAQR6Q6TCH4 344 aa12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 CCBE1Q6UXH8 406 aaPredicted RBP12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 RHNO1Q9BSD3 238 aa12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 ATPIF1Q9UII2 106 aa12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 UBR3Q6ZT12 1888 aa12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 PRSS44E7EML9 344 aa12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 SPDEFO95238 335 aa12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 LY86O95711 162 aa12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 STUMQ69YW2 141 aa12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 ZNF620Q6ZNG0 422 aa12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 NIPSNAP1Q9BPW8 284 aa12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 C20orf85Q9H1P6 137 aa12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 MMP25Q9NPA2 562 aa12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 HINT3Q9NQE9 182 aaKnown RBP12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 PRDM7Q9NQW5 492 aa12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 MTCH1Q9NZJ7 389 aa12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 TIMM9Q9Y5J7 89 aa12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 RGPD3A6NKT7 1758 aaPredicted RBP12.21□□□□□ -0.46
PDGFRB-201ENST00000261799 ZNF785A8K8V0 405 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 PRR33A8MZF0 331 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 CTSVO60911 334 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 RAF1P04049 648 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 SHC1P29353 583 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 PCK2Q16822 640 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 SFTPA2Q8IWL1 248 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 SIAEQ9HAT2 523 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 BARX1Q9HBU1 254 aaPredicted RBP12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 AGAP14A8MT82 685 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 FCMRO60667 390 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 HBE1P02100 147 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 GIFP27352 417 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 GNG10P50151 68 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 TAS2R45P59539 299 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 ANKRD13BQ86YJ7 626 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 OR2T6Q8NHC8 308 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 CMBLQ96DG6 245 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 MFFQ9GZY8 342 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 DFFBO76075 338 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 ZNF85Q03923 595 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 OR2B11Q5JQS5 317 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 SLC23A3Q6PIS1 610 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 PTPMT1Q8WUK0 201 aaPredicted RBP12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 WDR1O75083 606 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 MGST1P10620 155 aaKnown RBP12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 LIPAP38571 399 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 OR2T2Q6IF00 324 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 CNRIP1Q96F85 164 aaPredicted RBP12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 ADAM20O43506 726 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 ETHE1O95571 254 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 GALNSP34059 522 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 MRPS34P82930 218 aaKnown RBP12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 OR8G2PQ6IF36 304 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 LAMA4Q16363 1823 aa12.2□□□□□ -0.46
PDGFRB-201ENST00000261799 A0A1B0GTH9 108 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 RAB7AP51149 207 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 SLC17A1Q14916 467 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 LIPNQ5VXI9 398 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 PELI3Q8N2H9 469 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 SPICQ8N5J4 248 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 GMPPAQ96IJ6 420 aaPredicted RBP12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 C4orf45Q96LM5 186 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 MS4A5Q9H3V2 200 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 PSORS1C1Q9UIG5 152 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 ALPLP05186 524 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 OR5G3P0C626 314 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 FPR2P25090 351 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 OR3A4PP47883 348 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 EMX1Q04741 257 aaPredicted RBP12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 TCTN1Q2MV58 587 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 STEAP1BQ6NZ63 245 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 THNSL2Q86YJ6 484 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 C15orf54Q8N8G6 183 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 KDF1Q8NAX2 398 aaPredicted RBP12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 C17orf50Q8WW18 174 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 POM121L2Q96KW2 1035 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 DIRC2Q96SL1 478 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 B9D1Q9UPM9 204 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 H3BMQ9 156 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 MDH2P40926 338 aaKnown RBP12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 PRICKLE4Q2TBC4 344 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 BSCL2Q96G97 398 aaPredicted RBP12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 TINAGL1Q9GZM7 467 aaPredicted RBP12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 SAP30LQ9HAJ7 183 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 SMCO4Q9NRQ5 59 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 EPOPA6NHQ4 379 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms