RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 CYB561A3Q8NBI2 242 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 FOXC2Q99958 501 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 WACQ9BTA9 647 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 FN3KQ9H479 309 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 ABCB9Q9NP78 766 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 FGF20Q9NP95 211 aaPredicted RBP14.5□□□□□ -0.09
SDCBP-201ENST00000260130 KLHL21Q9UJP4 597 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 CREBBPQ92793 2442 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 FABP12A6NFH5 140 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 HMX3A6NHT5 357 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 CENPXA8MT69 81 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 APOBEC3AP31941 199 aaPredicted RBP14.49□□□□□ -0.09
SDCBP-201ENST00000260130 ART1P52961 327 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 LSM6P62312 80 aaKnown RBP14.49□□□□□ -0.09
SDCBP-201ENST00000260130 EFNB1P98172 346 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 PSG4Q00888 419 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 SLC27A4Q6P1M0 643 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 SLC37A3Q8NCC5 494 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 SLC30A7Q8NEW0 376 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 NUP37Q8NFH4 326 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 DIRAS2Q96HU8 199 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 PRRG3Q9BZD7 231 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 CA10Q9NS85 328 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 GSTK1Q9Y2Q3 226 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 EXOSC1Q9Y3B2 195 aaKnown RBP14.49□□□□□ -0.09
SDCBP-201ENST00000260130 A0A1W2PQL4 384 aaPredicted RBP14.49□□□□□ -0.09
SDCBP-201ENST00000260130 MEIOCA2RUB1 952 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 CCDC182A6NF36 153 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 PRODHO43272 600 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 TMCC2O75069 709 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 IFNGP01579 166 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 GLO1Q04760 184 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 DBPQ10586 325 aaPredicted RBP14.49□□□□□ -0.09
SDCBP-201ENST00000260130 TPBGQ13641 420 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 KCNMB1Q16558 191 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 C22orf42Q6IC83 251 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 ACSM5Q6NUN0 579 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 FBXL14Q8N1E6 418 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 MUC15Q8N387 334 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 CPEB3Q8NE35 698 aaKnown RBP14.49□□□□□ -0.09
SDCBP-201ENST00000260130 TMEM163Q8TC26 289 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 C11orf40Q8WZ69 217 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 OR2H1Q9GZK4 316 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 CMC2Q9NRP2 79 aa14.49□□□□□ -0.09
SDCBP-201ENST00000260130 RIIAD1A6NNX1 92 aa14.48□□□□□ -0.09
SDCBP-201ENST00000260130 SMPD2O60906 423 aa14.48□□□□□ -0.09
SDCBP-201ENST00000260130 GPANK1O95872 356 aa14.48□□□□□ -0.09
SDCBP-201ENST00000260130 CD8AP01732 235 aa14.48□□□□□ -0.09
SDCBP-201ENST00000260130 MRPS15P82914 257 aaKnown RBP14.48□□□□□ -0.09
SDCBP-201ENST00000260130 DTX2Q86UW9 622 aa14.48□□□□□ -0.09
SDCBP-201ENST00000260130 AKR7LQ8NHP1 331 aa14.48□□□□□ -0.09
SDCBP-201ENST00000260130 UFD1Q92890 307 aa14.48□□□□□ -0.09
SDCBP-201ENST00000260130 RNFT2Q96EX2 444 aa14.48□□□□□ -0.09
SDCBP-201ENST00000260130 ST6GAL2Q96JF0 529 aa14.48□□□□□ -0.09
SDCBP-201ENST00000260130 TRAF4Q9BUZ4 470 aaPredicted RBP14.48□□□□□ -0.09
SDCBP-201ENST00000260130 MIXL1Q9H2W2 232 aa14.48□□□□□ -0.09
SDCBP-201ENST00000260130 SPEF1Q9Y4P9 236 aa14.48□□□□□ -0.09
SDCBP-201ENST00000260130 HEATR1Q9H583 2144 aaKnown RBP14.48□□□□□ -0.09
SDCBP-201ENST00000260130 FAM171A2A8MVW0 826 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 GAAP10253 952 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 CCL2P13500 99 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 APEX1P27695 318 aaKnown RBP14.47□□□□□ -0.09
SDCBP-201ENST00000260130 TGM4P49221 684 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 GALK2Q01415 458 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 CRMP1Q14194 572 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 OTPQ5XKR4 325 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 VHLLQ6RSH7 139 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 OR1J2Q8NGS2 313 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 OR2T4Q8NH00 348 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 TMEM203Q969S6 136 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 WNT5BQ9H1J7 359 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 ZNF3P17036 446 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 STOMP27105 288 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 SDC2P34741 201 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 APLNRP35414 380 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 NKX6-1P78426 367 aaPredicted RBP14.47□□□□□ -0.09
SDCBP-201ENST00000260130 SCRN3Q0VDG4 424 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 SNTB2Q13425 540 aaKnown RBP14.47□□□□□ -0.09
SDCBP-201ENST00000260130 TBC1D28Q2M2D7 210 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 SLC26A10Q8NG04 563 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 CXXC4Q9H2H0 198 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 CBLN4Q9NTU7 201 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 ASH2LQ9UBL3 628 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 MYO9AB2RTY4 2548 aa14.47□□□□□ -0.09
SDCBP-201ENST00000260130 VSTM5A8MXK1 200 aa14.46□□□□□ -0.09
SDCBP-201ENST00000260130 OVOL3O00110 214 aa14.46□□□□□ -0.09
SDCBP-201ENST00000260130 TFP02787 698 aa14.46□□□□□ -0.09
SDCBP-201ENST00000260130 CSF3P09919 207 aa14.46□□□□□ -0.09
SDCBP-201ENST00000260130 GABRA5P31644 462 aa14.46□□□□□ -0.09
SDCBP-201ENST00000260130 THBS4P35443 961 aa14.46□□□□□ -0.09
SDCBP-201ENST00000260130 MTNR1AP48039 350 aa14.46□□□□□ -0.09
SDCBP-201ENST00000260130 PPP3R1P63098 170 aa14.46□□□□□ -0.09
SDCBP-201ENST00000260130 TESK1Q15569 626 aa14.46□□□□□ -0.09
SDCBP-201ENST00000260130 PYDC2Q56P42 97 aa14.46□□□□□ -0.09
SDCBP-201ENST00000260130 ZNF774Q6NX45 483 aa14.46□□□□□ -0.09
SDCBP-201ENST00000260130 RDH10Q8IZV5 341 aa14.46□□□□□ -0.09
SDCBP-201ENST00000260130 NMNAT2Q9BZQ4 307 aa14.46□□□□□ -0.09
SDCBP-201ENST00000260130 ZNF442Q9H7R0 627 aa14.46□□□□□ -0.09
SDCBP-201ENST00000260130 CDH20Q9HBT6 801 aa14.46□□□□□ -0.09
SDCBP-201ENST00000260130 DSCAMO60469 2012 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms