RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 ELMOD2Q8IZ81 293 aa17.33■□□□□ 0.37
SNRPA-201ENST00000243563 OR1J1Q8NGS3 322 aa17.33■□□□□ 0.37
SNRPA-201ENST00000243563 OR13C5Q8NGS8 318 aa17.33■□□□□ 0.37
SNRPA-201ENST00000243563 SLC25A40Q8TBP6 338 aa17.33■□□□□ 0.37
SNRPA-201ENST00000243563 APOBEC3DQ96AK3 386 aaPredicted RBP17.33■□□□□ 0.37
SNRPA-201ENST00000243563 PGLYRP3Q96LB9 341 aa17.33■□□□□ 0.37
SNRPA-201ENST00000243563 COG8Q96MW5 612 aa17.33■□□□□ 0.37
SNRPA-201ENST00000243563 TBCCD1Q9NVR7 557 aa17.33■□□□□ 0.37
SNRPA-201ENST00000243563 FZR1Q9UM11 496 aa17.33■□□□□ 0.37
SNRPA-201ENST00000243563 RAI1Q7Z5J4 1906 aaPredicted RBP17.33■□□□□ 0.37
SNRPA-201ENST00000243563 FASNP49327 2511 aaKnown RBP17.33■□□□□ 0.36
SNRPA-201ENST00000243563 ZFPL1O95159 310 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 IGLV3-1P01715 115 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 CD3EP07766 207 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 MPV17P39210 176 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 MAGEB1P43366 347 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 DAZAP2Q15038 168 aaPredicted RBP17.32■□□□□ 0.36
SNRPA-201ENST00000243563 SSX1Q16384 188 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 VHLLQ6RSH7 139 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 ARL9Q6T311 187 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 EGFL6Q8IUX8 553 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 OR51E1Q8TCB6 317 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 MRPS26Q9BYN8 205 aaKnown RBP17.32■□□□□ 0.36
SNRPA-201ENST00000243563 OR2J1Q9GZK6 312 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 DCHS2Q6V1P9 2916 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 TRBV2A0A0J9YWF9 115 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 A0A1B0GTI1 187 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 A6NNC1 897 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 E7EQL1 145 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 LMX1BO60663 402 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 CELP19835 753 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 PSMB9P28065 219 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 THBS4P35443 961 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 LIPAP38571 399 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 SLC3A1Q07837 685 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 MLLT11Q13015 90 aaPredicted RBP17.32■□□□□ 0.36
SNRPA-201ENST00000243563 TSTQ16762 297 aaKnown RBP17.32■□□□□ 0.36
SNRPA-201ENST00000243563 TIGD6Q17RP2 521 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 LIPKQ5VXJ0 399 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 RPL22L1Q6P5R6 122 aaKnown RBP17.32■□□□□ 0.36
SNRPA-201ENST00000243563 OR51A4Q8NGJ6 313 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 TMEM171Q8WVE6 324 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 KCNS3Q9BQ31 491 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 EIF3KQ9UBQ5 218 aaKnown RBP17.32■□□□□ 0.36
SNRPA-201ENST00000243563 RNF115Q9Y4L5 304 aa17.32■□□□□ 0.36
SNRPA-201ENST00000243563 ROS1P08922 2347 aa17.31■□□□□ 0.36
SNRPA-201ENST00000243563 ABCA4P78363 2273 aa17.31■□□□□ 0.36
SNRPA-201ENST00000243563 APOC1P02654 83 aa17.31■□□□□ 0.36
SNRPA-201ENST00000243563 TFAP2AP05549 437 aa17.31■□□□□ 0.36
SNRPA-201ENST00000243563 RGS6P49758 472 aa17.31■□□□□ 0.36
SNRPA-201ENST00000243563 TNK1Q13470 666 aa17.31■□□□□ 0.36
SNRPA-201ENST00000243563 GK2Q14410 553 aaPredicted RBP17.31■□□□□ 0.36
SNRPA-201ENST00000243563 ALKBH6Q3KRA9 238 aa17.31■□□□□ 0.36
SNRPA-201ENST00000243563 CCDC58Q4VC31 144 aa17.31■□□□□ 0.36
SNRPA-201ENST00000243563 ARMCX4Q5H9R4 360 aa17.31■□□□□ 0.36
SNRPA-201ENST00000243563 LRP11Q86VZ4 500 aa17.31■□□□□ 0.36
SNRPA-201ENST00000243563 TMIGD2Q96BF3 282 aa17.31■□□□□ 0.36
SNRPA-201ENST00000243563 SMIM19Q96E16 107 aa17.31■□□□□ 0.36
SNRPA-201ENST00000243563 MARS2Q96GW9 593 aaKnown RBP17.31■□□□□ 0.36
SNRPA-201ENST00000243563 REEP6Q96HR9 211 aa17.31■□□□□ 0.36
SNRPA-201ENST00000243563 MYCBPQ99417 103 aaPredicted RBP17.31■□□□□ 0.36
SNRPA-201ENST00000243563 MOB1AQ9H8S9 216 aa17.31■□□□□ 0.36
SNRPA-201ENST00000243563 SLC24A3Q9HC58 644 aa17.31■□□□□ 0.36
SNRPA-201ENST00000243563 GPR84Q9NQS5 396 aa17.31■□□□□ 0.36
SNRPA-201ENST00000243563 ATP23Q9Y6H3 246 aa17.31■□□□□ 0.36
SNRPA-201ENST00000243563 JUNBP17275 347 aaPredicted RBP17.3■□□□□ 0.36
SNRPA-201ENST00000243563 CCR9P51686 369 aa17.3■□□□□ 0.36
SNRPA-201ENST00000243563 BDH1Q02338 343 aa17.3■□□□□ 0.36
SNRPA-201ENST00000243563 INSL4Q14641 139 aa17.3■□□□□ 0.36
SNRPA-201ENST00000243563 SYT6Q5T7P8 510 aaPredicted RBP17.3■□□□□ 0.36
SNRPA-201ENST00000243563 OR10A2Q9H208 303 aa17.3■□□□□ 0.36
SNRPA-201ENST00000243563 PLEKHB1Q9UF11 243 aaPredicted RBP17.3■□□□□ 0.36
SNRPA-201ENST00000243563 KCNN3Q9UGI6 736 aa17.3■□□□□ 0.36
SNRPA-201ENST00000243563 LOC107986453A0A1B0GWG9 222 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 ACOD1A6NK06 481 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 PLPP2O43688 288 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 CLPTM1O96005 669 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 CPEP16870 476 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 NR1H2P55055 460 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 RPS11P62280 158 aaKnown RBP eCLIP17.29■□□□□ 0.36
SNRPA-201ENST00000243563 MRPL28Q13084 256 aaKnown RBP17.29■□□□□ 0.36
SNRPA-201ENST00000243563 TPBGQ13641 420 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 ZNF704Q6ZNC4 412 aaPredicted RBP17.29■□□□□ 0.36
SNRPA-201ENST00000243563 PHC2Q8IXK0 858 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 NUP37Q8NFH4 326 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 OR52H1Q8NGJ2 320 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 FCGR1BQ92637 280 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 GHSRQ92847 366 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 SPSB4Q96A44 273 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 ISYNA1Q9NPH2 558 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 CA10Q9NS85 328 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 MYEF2Q9P2K5 600 aaKnown RBP17.29■□□□□ 0.36
SNRPA-201ENST00000243563 SF3B6Q9Y3B4 125 aaKnown RBP17.29■□□□□ 0.36
SNRPA-201ENST00000243563 A0A0U1RQV5 110 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 FAM221AA4D161 298 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 LILRA1O75019 489 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 COX6B1P14854 86 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 GLRXP35754 106 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 TGFBR2P37173 567 aa17.29■□□□□ 0.36
SNRPA-201ENST00000243563 RAD52P43351 418 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms