RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 EXTL1Q92935 676 aa12.6□□□□□ -0.39
TARDBP-201ENST00000240185 DERL3Q96Q80 235 aa12.6□□□□□ -0.39
TARDBP-201ENST00000240185 OR2A14Q96R47 310 aa12.6□□□□□ -0.39
TARDBP-201ENST00000240185 PRRX2Q99811 253 aa12.6□□□□□ -0.39
TARDBP-201ENST00000240185 MENTQ9BUN1 341 aa12.6□□□□□ -0.39
TARDBP-201ENST00000240185 ELOVL1Q9BW60 279 aa12.6□□□□□ -0.39
TARDBP-201ENST00000240185 A0A1W2PPH5 198 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 M0R082 166 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 CYBAP13498 195 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 MAML2Q8IZL2 1156 aaPredicted RBP12.59□□□□□ -0.39
TARDBP-201ENST00000240185 OR4S1Q8NGB4 309 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 GOT1L1Q8NHS2 421 aaPredicted RBP12.59□□□□□ -0.39
TARDBP-201ENST00000240185 TAAR2Q9P1P5 351 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 LRRC30A6NM36 301 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 FAM166BA8MTA8 275 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 GATCO43716 136 aaKnown RBP12.59□□□□□ -0.39
TARDBP-201ENST00000240185 SSBP1Q04837 148 aaKnown RBP12.59□□□□□ -0.39
TARDBP-201ENST00000240185 TBC1D28Q2M2D7 210 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 PLA1AQ53H76 456 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 ABHD17CQ6PCB6 329 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 BTNL3Q6UXE8 466 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 PDXPQ96GD0 296 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 MEIKINA0A087WXM9 373 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 M0R1X1 148 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 RGS13O14921 159 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 CTSAP10619 480 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 NID1P14543 1247 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 CTF1Q16619 201 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 SLC25A35Q3KQZ1 300 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 BTLAQ7Z6A9 289 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 PRSS3P2Q8NHM4 247 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 OR10C1Q96KK4 312 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 TAAR9Q96RI9 348 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 ESRP2Q9H6T0 727 aaKnown RBP12.59□□□□□ -0.39
TARDBP-201ENST00000240185 PLEKHB1Q9UF11 243 aaPredicted RBP12.59□□□□□ -0.39
TARDBP-201ENST00000240185 MRC1P22897 1456 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 MICAL3Q7RTP6 2002 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 RGPD1P0DJD0 1748 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 IQCF3P0C7M6 154 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 SMIM17P0DL12 118 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 DUSP5Q16690 384 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 CLPPQ16740 277 aaPredicted RBP12.59□□□□□ -0.39
TARDBP-201ENST00000240185 VRK3Q8IV63 474 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 RHNO1Q9BSD3 238 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 TMEM9BQ9NQ34 198 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 GPR84Q9NQS5 396 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 IL17BQ9UHF5 180 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 TIMM9Q9Y5J7 89 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 CROCCQ5TZA2 2017 aa12.59□□□□□ -0.39
TARDBP-201ENST00000240185 C5orf52A6NGY3 159 aa12.58□□□□□ -0.39
TARDBP-201ENST00000240185 NCBP2LA6PVI3 153 aaKnown RBP12.58□□□□□ -0.39
TARDBP-201ENST00000240185 SIRPB1O00241 398 aa12.58□□□□□ -0.39
TARDBP-201ENST00000240185 ICAM2P13598 275 aa12.58□□□□□ -0.39
TARDBP-201ENST00000240185 INPP5JQ15735 1006 aaPredicted RBP12.58□□□□□ -0.39
TARDBP-201ENST00000240185 MEGF10Q96KG7 1140 aa12.58□□□□□ -0.39
TARDBP-201ENST00000240185 TRAF4Q9BUZ4 470 aaPredicted RBP12.58□□□□□ -0.39
TARDBP-201ENST00000240185 JAM3Q9BX67 310 aa12.58□□□□□ -0.39
TARDBP-201ENST00000240185 MYO18AQ92614 2054 aaKnown RBP12.58□□□□□ -0.4
TARDBP-201ENST00000240185 ELOA3CA0A087WX78 387 aaPredicted RBP12.58□□□□□ -0.4
TARDBP-201ENST00000240185 RPLP1P05386 114 aaKnown RBP12.58□□□□□ -0.4
TARDBP-201ENST00000240185 CD200P41217 278 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 PFN3P60673 137 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 TAZQ16635 292 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 RTL8BQ17RB0 113 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 ABLIM2Q6H8Q1 611 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 HTR3DQ70Z44 454 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 ORAI1Q96D31 301 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 C19orf43Q9BQ61 176 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 SH2D1BO14796 132 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 FAM87AP0C7U9 286 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 RPS27P42677 84 aaKnown RBP12.58□□□□□ -0.4
TARDBP-201ENST00000240185 CSNK1G2P78368 415 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 STUMQ69YW2 141 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 LSRQ86X29 649 aaPredicted RBP12.58□□□□□ -0.4
TARDBP-201ENST00000240185 ARHGEF39Q8N4T4 335 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 S1PR3Q99500 378 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 POLDIP2Q9Y2S7 368 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 K7ERU9 68 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 ABCD3P28288 659 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 PSMB2P49721 201 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 ZNF385BQ569K4 471 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 LYSMD4Q5XG99 296 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 AFMIDQ63HM1 303 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 RHBDD1Q8TEB9 315 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 GPR137Q96N19 417 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 GPR87Q9BY21 358 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 PDLIM7Q9NR12 457 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 SLC22A13Q9Y226 551 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 SLC5A6Q9Y289 635 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 MYH15Q9Y2K3 1946 aa12.58□□□□□ -0.4
TARDBP-201ENST00000240185 SCRG1O75711 98 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 ACAA1P09110 424 aaPredicted RBP12.57□□□□□ -0.4
TARDBP-201ENST00000240185 MEOX1P50221 254 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 GUCA2AQ02747 115 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 WDR74Q6RFH5 385 aaPredicted RBP12.57□□□□□ -0.4
TARDBP-201ENST00000240185 TMEM229BQ8NBD8 167 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 HLA-CQ95604 372 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 ADGRG7Q96K78 797 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 LMAN1LQ9HAT1 526 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 TRAPPC4Q9Y296 219 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms