RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Ssxb2Q8C5Z3 165 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Sdhaf2Q8C6I2 164 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 PurgQ8R4E6 350 aaKnown RBP9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr1277Q8VF41 303 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr993Q8VF75 314 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr98Q8VFD9 309 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Galnt11Q921L8 608 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Il36bQ9D6Z6 183 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Sp6Q9ESX2 376 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Nrg4Q9WTX4 115 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr545Q9WU94 316 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 4930433I11RikA0A0U1RPT6 723 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Vsig10l2A0A140LHF2 776 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr228A0A1L1SR98 313 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 AI182371A2AS37 356 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm15821A6X8J8 139 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm4950D3YUM8 205 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr913E9Q716 312 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Vmn2r58K7N6V2 862 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Vmn1r170K7N6W9 304 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr597L7N224 315 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 P01851 173 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 P01852 173 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Eif4eP63073 217 aaKnown RBP9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gramd2aQ3V3G7 320 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Sim2Q61079 657 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr688Q6W049 321 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Zfp819Q80V81 607 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 F830045P16RikQ8BJ95 487 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Prss27Q8BJR6 328 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tnfsfm13Q8BXS2 410 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 CdnfQ8CC36 187 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Lysmd4Q8CC84 293 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr1257Q8VGP0 309 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Slc33a1Q99J27 550 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Sntb1Q99L88 537 aaKnown RBP9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Q9CWB7 115 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Sult1b1Q9QWG7 299 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cxcl15Q9WVL7 167 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Bpnt1Q9Z0S1 308 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm15013V9GWY0 266 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Psg20E9Q9B4 475 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Kcnk3O35111 409 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Dpm1O70152 260 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 P06335 190 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 LumP51885 338 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Sirt6P59941 334 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 CtseP70269 397 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 N4bp2l1Q3V2Q8 238 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Commd3Q63829 195 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tmprss11gQ8BZ10 417 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Amdhd2Q8JZV7 409 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 RabepkQ8VCH5 380 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rbm39Q8VH51 530 aaKnown RBP9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rab31Q921E2 194 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cnih4Q9CX13 139 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 HraslsQ9QZU4 167 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Nubp2Q9R061 275 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr199F6ZUS0 308 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Zfp708F8VPP0 541 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Psmb1O09061 240 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Hprt1P00493 218 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 LplP11152 474 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cd1d1P11609 336 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cd1d2P11610 336 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Selenbp1P17563 472 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 MgmtP26187 211 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 VtnP29788 478 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rab3cP62823 227 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Garem1Q3UFT3 876 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tmem222Q8BVA2 208 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Elf5Q8VDK3 253 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tmem25Q9DCF1 365 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ap4m1Q9JKC7 449 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Opn4Q9QXZ9 521 aa9.39□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr1255A2AUA4 310 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr623E9Q382 317 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Yjefn3F6W8I0 251 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Slc16a7O70451 484 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Hoxc11P31313 304 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 CryzP47199 331 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ucp3P56501 308 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Agbl4Q09LZ8 540 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 March9Q3TZ87 348 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm648Q3UJ22 213 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 St6gal2Q76K27 524 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr527Q7TRT9 305 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Slc22a20Q80UJ1 556 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cnot4Q8BT14 575 aaKnown RBP9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Reep4Q8K072 257 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rpusd1Q8VCZ8 306 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cdc42ep3Q9CQC5 254 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Mettl21AQ9CQL0 218 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Syt7Q9R0N7 403 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rpl7a-ps5A0A140T8L3 268 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 FcmrA1KXC4 422 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Vmn2r16E9Q025 850 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr370E9Q848 314 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gabrg2P22723 474 aa9.38□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rab19P35294 217 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 68 ms