RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Vmn1r68E9Q0V3 319 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Gm5458L7N219 204 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Rad51dO55230 329 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Cldn2O88552 230 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Il2raP01590 268 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Tnfrsf4P47741 272 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Rps15aP62245 130 aaKnown RBP10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Ces2fQ08ED5 561 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Nudt18Q3U2V3 323 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Psg26Q4KL65 475 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Eif1aQ60872 144 aaKnown RBP10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 CishQ62225 257 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 GcsamQ6RFH4 181 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Hsh2dQ6VYH9 334 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Znf250Q7TNU6 535 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Olfr1173Q7TR24 312 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Kiaa1456Q80WQ4 447 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Crls1Q80ZM8 303 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Cldn34b3Q80ZS5 209 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Zfp947Q8BIQ6 437 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Arl14epQ8BIX3 276 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Eif1axQ8BMJ3 144 aaKnown RBP10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Ip6k3Q8BWD2 396 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Dzank1Q8C008 778 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Rfwd3Q8CIK8 774 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 P2rx2Q8K3P1 485 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Lrrc61Q8R2R5 259 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Mitd1Q8VDV8 249 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Olfr394Q8VGR5 310 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Mrm1Q99J25 320 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Yaf2Q99LW6 179 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Pop4Q9CR08 221 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Med8Q9D7W5 268 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Ap4m1Q9JKC7 449 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 BlnkQ9QUN3 457 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 PrknQ9WVS6 464 aa10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 SncgQ9Z0F7 123 aaKnown RBP10.91□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Wdfy3Q6VNB8 3508 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Btbd8D3YUB6 377 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Npffr1E9Q468 432 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Olfr568E9Q554 313 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Gm21411J3KMS0 136 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Ndufb11O09111 151 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Emg1O35130 244 aaKnown RBP10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Nfkbil1O88995 381 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Ighg1P01869 393 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Rpl18P35980 188 aaKnown RBP10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Tacr3P47937 452 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Hnrnpa1P49312 320 aaKnown RBP10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Hist1h2baP70696 127 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Csn1s2aQ02862 184 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 A4gntQ14BT6 341 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Gm2016Q3TQZ4 144 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Them4Q3UUI3 230 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Trp53i11Q4QQM4 189 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Kcnc3Q63959 769 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 CslQ80X68 466 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Zfp790Q80ZX2 779 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Fjx1Q8BQB4 450 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Banf2Q8BVR0 90 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Prps1l1Q8C5R8 318 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Ctxn1Q8K129 82 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Fbxo45Q8K3B1 286 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Slc35a3Q8R1T4 326 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Commd5Q8R395 224 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Olfr1501Q8VFQ3 315 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Olfr812Q8VG64 310 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Fyttd1Q91Z49 317 aaKnown RBP10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Teddm3Q9CQH1 294 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Ankrd22Q9D3J5 191 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Smco4Q9JIS3 59 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Lhx6Q9R1R0 363 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Minpp1Q9Z2L6 481 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Snrnp200Q6P4T2 2136 aaKnown RBP10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Greb1Q3UHK3 1954 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Igkv10-95A0A0G2JFY3 115 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Olfr1082A0A1L1SUC9 313 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Olfr1289A0A288CFY5 326 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Olfr115B2RTB9 312 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 5430403G16RikD3Z5L4 667 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Vmn2r16E9Q025 850 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Vmn2r124K7N789 855 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Gm3633L7N233 213 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Gm9611L7N476 213 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Efna4O08542 206 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Fgf4P11403 202 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Nme1P15532 152 aaKnown RBP10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Adh5P28474 374 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Nup43P59235 380 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Kcnj3P63250 501 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Olfr1136Q0VBI4 310 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Perm1Q149B8 807 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Klhdc2Q4G5Y1 406 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Rnase12Q5GAM8 145 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Hsf5Q5ND04 624 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Serinc4Q5XK03 492 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Elavl3Q60900 367 aaKnown RBP10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Adat3Q6PAT0 349 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 Pif1Q80SX8 650 aa10.9□□□□□ -0.66
Ufd1-201ENSMUST00000005394 TMEM229BQ8BFQ2 167 aa10.9□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 112.2 ms