RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 TMEM171Q8WVE6 324 aa8.15□□□□□ -1.1
PHGDH-228ENST00000641847 RNF133Q8WVZ7 376 aa8.15□□□□□ -1.1
PHGDH-228ENST00000641847 SPRYD4Q8WW59 207 aaPredicted RBP8.15□□□□□ -1.1
PHGDH-228ENST00000641847 C4orf36Q96KX1 117 aa8.15□□□□□ -1.1
PHGDH-228ENST00000641847 MYCBPQ99417 103 aaPredicted RBP8.15□□□□□ -1.1
PHGDH-228ENST00000641847 COQ7Q99807 217 aa8.15□□□□□ -1.1
PHGDH-228ENST00000641847 WNT5BQ9H1J7 359 aa8.15□□□□□ -1.1
PHGDH-228ENST00000641847 ISG20L2Q9H9L3 353 aaKnown RBP8.15□□□□□ -1.1
PHGDH-228ENST00000641847 VCX3AQ9NNX9 186 aa8.15□□□□□ -1.1
PHGDH-228ENST00000641847 OBP2BQ9NPH6 170 aa8.15□□□□□ -1.1
PHGDH-228ENST00000641847 ACOT13Q9NPJ3 140 aa8.15□□□□□ -1.1
PHGDH-228ENST00000641847 CENPMQ9NSP4 180 aa8.15□□□□□ -1.1
PHGDH-228ENST00000641847 DDX28Q9NUL7 540 aaKnown RBP8.15□□□□□ -1.1
PHGDH-228ENST00000641847 MRM2Q9UI43 246 aaKnown RBP8.15□□□□□ -1.1
PHGDH-228ENST00000641847 CDC42EP3Q9UKI2 254 aa8.15□□□□□ -1.1
PHGDH-228ENST00000641847 LSM2Q9Y333 95 aaKnown RBP8.15□□□□□ -1.1
PHGDH-228ENST00000641847 CAB39Q9Y376 341 aaPredicted RBP8.15□□□□□ -1.1
PHGDH-228ENST00000641847 LRP12Q9Y561 859 aa8.15□□□□□ -1.1
PHGDH-228ENST00000641847 A0A1W2PPR1 153 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 OR6C6A6NF89 314 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 SYNGR3O43761 229 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 SULT1C4O75897 302 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 RPP14O95059 124 aaKnown RBP8.14□□□□□ -1.11
PHGDH-228ENST00000641847 LCKP06239 509 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 PCMT1P22061 227 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 RIDAP52758 137 aaKnown RBP8.14□□□□□ -1.11
PHGDH-228ENST00000641847 ATP5J2P56134 94 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 OR12D2P58182 307 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 RAB1AP62820 205 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 GRB2P62993 217 aaKnown RBP8.14□□□□□ -1.11
PHGDH-228ENST00000641847 DOC2BQ14184 412 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 MED22Q15528 200 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 P2RY8Q86VZ1 359 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 KLBQ86Z14 1044 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 SYS1Q8N2H4 156 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 OR1F12Q8NHA8 337 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 GATAD2BQ8WXI9 593 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 FCGR1BQ92637 280 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 OR5M11Q96RB7 305 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 ATF6BQ99941 703 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 MROQ9BYG7 248 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 OR10A4Q9H209 315 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 ELOVL3Q9HB03 270 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 TRIM36Q9NQ86 728 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 B3GNT2Q9NY97 397 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 SCOCQ9UIL1 159 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 FBXL3Q9UKT7 428 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 SLC25A15Q9Y619 301 aa8.14□□□□□ -1.11
PHGDH-228ENST00000641847 IQCMA0A1B0GVH7 501 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 A8MV72 311 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-228ENST00000641847 CD5LO43866 347 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 ZNF254O75437 659 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 CLPTM1O96005 669 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 LALBAP00709 142 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 CELA3BP08861 270 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 TACSTD2P09758 323 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 HSMCR30P0CW71 290 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 CBR1P16152 277 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 CRYGSP22914 178 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 APEX1P27695 318 aaKnown RBP8.13□□□□□ -1.11
PHGDH-228ENST00000641847 PSMB9P28065 219 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 PSMB10P40306 273 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 IDH3GP51553 393 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-228ENST00000641847 PSMA6P60900 246 aaKnown RBP8.13□□□□□ -1.11
PHGDH-228ENST00000641847 PLP2Q04941 152 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 ECH1Q13011 328 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 TNK1Q13470 666 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 RAB39AQ14964 217 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 PPA1Q15181 289 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 SPHARQ15513 63 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 TAB1Q15750 504 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 UBE2UQ5VVX9 321 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 LIPNQ5VXI9 398 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 XAF1Q6GPH4 301 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 ALKBH2Q6NS38 261 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 DEGS2Q6QHC5 323 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 KCTD20Q7Z5Y7 419 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-228ENST00000641847 ZNF584Q8IVC4 421 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 ALDH16A1Q8IZ83 802 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 ZNF283Q8N7M2 679 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 ZNF485Q8NCK3 441 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 CPEB3Q8NE35 698 aaKnown RBP8.13□□□□□ -1.11
PHGDH-228ENST00000641847 SLC7A6Q92536 515 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 RORBQ92753 470 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 MUL1Q969V5 352 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 SPTSSAQ969W0 71 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 MUCL1Q96DR8 90 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 PELI1Q96FA3 418 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 PIK3IP1Q96FE7 263 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 DOK1Q99704 481 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 KCNJ15Q99712 375 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 USB1Q9BQ65 265 aaKnown RBP8.13□□□□□ -1.11
PHGDH-228ENST00000641847 MED18Q9BUE0 208 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 C19orf24Q9BVV8 132 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 ATPIF1Q9UII2 106 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 GRIP1Q9Y3R0 1128 aa8.13□□□□□ -1.11
PHGDH-228ENST00000641847 RNF223E7ERA6 249 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 E9PI62 339 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 F5H5K5 113 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms