RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 WFIKKN1Q96NZ8 548 aa5.82□□□□□ -1.48
UPF3B-205ENST00000636792 DOK1Q99704 481 aa5.82□□□□□ -1.48
UPF3B-205ENST00000636792 TMEM204Q9BSN7 226 aa5.82□□□□□ -1.48
UPF3B-205ENST00000636792 MND1Q9BWT6 205 aa5.82□□□□□ -1.48
UPF3B-205ENST00000636792 C1QTNF5Q9BXJ0 243 aa5.82□□□□□ -1.48
UPF3B-205ENST00000636792 ZNF696Q9H7X3 374 aa5.82□□□□□ -1.48
UPF3B-205ENST00000636792 VCX3AQ9NNX9 186 aa5.82□□□□□ -1.48
UPF3B-205ENST00000636792 ISYNA1Q9NPH2 558 aa5.82□□□□□ -1.48
UPF3B-205ENST00000636792 ERVK13-1Q9NX77 482 aa5.82□□□□□ -1.48
UPF3B-205ENST00000636792 EIF3KQ9UBQ5 218 aaKnown RBP5.82□□□□□ -1.48
UPF3B-205ENST00000636792 NUFIP1Q9UHK0 495 aaKnown RBP5.82□□□□□ -1.48
UPF3B-205ENST00000636792 RALYQ9UKM9 306 aaKnown RBP5.82□□□□□ -1.48
UPF3B-205ENST00000636792 ERGIC3Q9Y282 383 aa5.82□□□□□ -1.48
UPF3B-205ENST00000636792 LRP12Q9Y561 859 aa5.82□□□□□ -1.48
UPF3B-205ENST00000636792 IGHV2OR16-5A0A0B4J2B6 119 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 A0A0U1RQV5 110 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.81□□□□□ -1.48
UPF3B-205ENST00000636792 LOC390937A0A1W2PQ73 354 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 ZNF503-AS2A6NEH8 195 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 DHRS7CA6NNS2 312 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 FAM171A2A8MVW0 826 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 XPNPEP2O43895 674 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 CD3EP07766 207 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 MRPL3P09001 348 aaKnown RBP5.81□□□□□ -1.48
UPF3B-205ENST00000636792 ACSM4P0C7M7 580 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 UBCP0CG48 685 aaKnown RBP5.81□□□□□ -1.48
UPF3B-205ENST00000636792 ZNF35P13682 527 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 SELEP16581 610 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 CD53P19397 219 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 EVX1P49640 407 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 TUBA4AP68366 448 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 ZNF85Q03923 595 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 MALLQ13021 153 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 GPR50Q13585 617 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 RAB39AQ14964 217 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 TAF13Q15543 124 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 TSC22D1Q15714 1073 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 MOGQ16653 247 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 ZMAT1Q5H9K5 638 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 FAM209AQ5JX71 171 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 ZNF774Q6NX45 483 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 ZNF773Q6PK81 442 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 ZNF584Q8IVC4 421 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 LINC00346Q8IVM7 164 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 FTMTQ8N4E7 242 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 RPS4Y2Q8TD47 263 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 THEM6Q8WUY1 208 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 GGHQ92820 318 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 C10orf35Q96D05 121 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 C4orf45Q96LM5 186 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 ALG8Q9BVK2 526 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 NOX3Q9HBY0 568 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 ABCB9Q9NP78 766 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 TRIM36Q9NQ86 728 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 FAIMQ9NVQ4 179 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 NPAP1Q9NZP6 1156 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 CRIM1Q9NZV1 1036 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 IKZF2Q9UKS7 526 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 EDARQ9UNE0 448 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 COPS3Q9UNS2 423 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 NOP16Q9Y3C1 178 aaKnown RBP5.81□□□□□ -1.48
UPF3B-205ENST00000636792 RNF115Q9Y4L5 304 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 SNX5Q9Y5X3 404 aa5.81□□□□□ -1.48
UPF3B-205ENST00000636792 USP9XQ93008 2570 aaPredicted RBP5.81□□□□□ -1.48
UPF3B-205ENST00000636792 LOC100509620A0A075B734 347 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 A0A087WXM4 84 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 C5orf49A4QMS7 147 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 TRIM64CA6NLI5 447 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 TMEM212A6NML5 194 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 A6NNC1 897 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 DEFB108AA8MXU0 73 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 LOC110117498-PIK3R3F6TDL0 507 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 M0R1B8 84 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 ABCD4O14678 606 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 SMPD2O60906 423 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 SRSF10O75494 262 aaKnown RBP5.8□□□□□ -1.48
UPF3B-205ENST00000636792 MTRF1O75570 445 aaKnown RBP5.8□□□□□ -1.48
UPF3B-205ENST00000636792 CLDN1O95832 211 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 GPANK1O95872 356 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 ISG15P05161 165 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 HTR1AP08908 422 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 LIMS3P0CW19 117 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 LIMS4P0CW20 117 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 NR4A1P22736 598 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 EEF1B2P24534 225 aaKnown RBP5.8□□□□□ -1.48
UPF3B-205ENST00000636792 PSMA1P25786 263 aaKnown RBP5.8□□□□□ -1.48
UPF3B-205ENST00000636792 APEX1P27695 318 aaKnown RBP5.8□□□□□ -1.48
UPF3B-205ENST00000636792 SSTR2P30874 369 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 GLRXP35754 106 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 LIPAP38571 399 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 DDOSTP39656 456 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 ZNF83P51522 516 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 GBX2P52951 348 aaPredicted RBP5.8□□□□□ -1.48
UPF3B-205ENST00000636792 UCP2P55851 309 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 SELENOVP59797 346 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 NKX6-1P78426 367 aaPredicted RBP5.8□□□□□ -1.48
UPF3B-205ENST00000636792 TLE4Q04727 773 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 PIGFQ07326 219 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 BSPH1Q075Z2 132 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 IRF3Q14653 427 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms