RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 TINAGQ9UJW2 476 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 EMC9Q9Y3B6 208 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 PEX16Q9Y5Y5 336 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 C2CD3Q4AC94 2353 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 TRAV1-2A0A0B4J238 106 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 IQCMA0A1B0GVH7 501 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 OR14I1A6ND48 311 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 ACOD1A6NK06 481 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 CFL1P23528 166 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 OR10A3P58181 314 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 GRB2P62993 217 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 TLE4Q04727 773 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 STK11Q15831 433 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 ODF4Q2M2E3 257 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 CEP78Q5JTW2 689 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 CDH24Q86UP0 819 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF100Q8IYN0 542 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 CA5BP1Q8WTZ4 195 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 ASB5Q8WWX0 329 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 GFI1Q99684 422 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 WDR12Q9GZL7 423 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 GLRX2Q9NS18 164 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 DDX28Q9NUL7 540 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 UPB1Q9UBR1 384 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 OR52A1Q9UKL2 312 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 F8P00451 2351 aa8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 INTS1Q8N201 2190 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-223ENST00000627587 TRBV5-7A0A0A0MS05 114 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 ARPC4-TTLL3A0A0A6YYG9 625 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 C5orf63A6NC05 138 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 CLDN25C9JDP6 229 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF587BE7ETH6 402 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 H3BSH0 61 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 RPL36A-HNRNPH2H7BZ11 118 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 C19orf84I3L1E1 186 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 DOK2O60496 412 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 FARS2O95363 451 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 CST2P09228 141 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 B4GALT1P15291 398 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 AGTR1P30556 359 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 THBS2P35442 1172 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 PSMA6P60900 246 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF846Q147U1 533 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 GUSBP1Q15486 140 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 NRN1LQ496H8 165 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 CCDC92Q53HC0 331 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 BCL2L15Q5TBC7 163 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 MEX3BQ6ZN04 569 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF704Q6ZNC4 412 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 PRSS45Q7RTY3 260 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 DOLPP1Q86YN1 238 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 CROCCP3Q8IVE0 287 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 SLC22A24Q8N4F4 322 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 OR5M9Q8NGP3 310 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 FGFBP3Q8TAT2 258 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 TSEN15Q8WW01 171 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 GMPPAQ96IJ6 420 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 TRIB1Q96RU8 372 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 DMRTA2Q96SC8 542 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 ATF6BQ99941 703 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 SH3GL3Q99963 347 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 SLC30A2Q9BRI3 323 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 MIXL1Q9H2W2 232 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 MOB1AQ9H8S9 216 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 SMURF1Q9HCE7 757 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 NOX4Q9NPH5 578 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 PLEK2Q9NYT0 353 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF224Q9NZL3 707 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF319Q9P2F9 582 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 AHRRA9YTQ3 701 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 J3QRK9 145 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 RGS5O15539 181 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 TTRP02766 147 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 RAF1P04049 648 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 UBCP0CG48 685 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 RAB3BP20337 219 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 OTX1P32242 354 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 SOX2P48431 317 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 PRKXP51817 358 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 SCRN3Q0VDG4 424 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 DCTN2Q13561 401 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 TMEM244Q5VVB8 128 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF813Q6ZN06 617 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 ABHD12BQ7Z5M8 362 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 UBE2J2Q8N2K1 259 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 TMEM106AQ96A25 262 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 CEP19Q96LK0 163 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 SLITRK2Q9H156 845 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 ZCCHC4Q9H5U6 513 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 PLGRKTQ9HBL7 147 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 BRD7Q9NPI1 651 aa8.3□□□□□ -1.08
PDLIM5-223ENST00000627587 PCNX1Q96RV3 2341 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 TRAV8-7A0A075B6U6 113 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 ANKRD61A6NGH8 418 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 LMX1BO60663 402 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 SS18L1O75177 396 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 ISG15P05161 165 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 CD2P06729 351 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 PATE4P0C8F1 98 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 ADRA2CP18825 462 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms