RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 OR52D1Q9H346 318 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 BAIAP2Q9UQB8 552 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 NINQ8N4C6 2090 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 IGHV1-45A0A0A0MS14 117 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 NSG1A0A0A6YYJ2 146 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 A0A1W2PQ72 361 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 CDC14CA4D256 554 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 IFI6P09912 130 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 COX6A1P12074 109 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 ERP29P30040 261 aaKnown RBP10.33□□□□□ -0.76
LINC00538-201ENST00000626109 FAM3BP58499 235 aaPredicted RBP10.33□□□□□ -0.76
LINC00538-201ENST00000626109 FGL1Q08830 312 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 SRSF6Q13247 344 aaKnown RBP10.33□□□□□ -0.76
LINC00538-201ENST00000626109 TCTE3Q8IZS6 198 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 BCORP1Q8N888 145 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 CDRT4Q8N9R6 151 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 OR11G2Q8NGC1 345 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 ADAMTS17Q8TE56 1095 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 DOK4Q8TEW6 326 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 SCARB1Q8WTV0 552 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 SNRNP40Q96DI7 357 aaKnown RBP10.33□□□□□ -0.76
LINC00538-201ENST00000626109 DCBLD2Q96PD2 775 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 STACQ99469 402 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 MESP1Q9BRJ9 268 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 ALG8Q9BVK2 526 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 OR8D2Q9GZM6 311 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 HINT3Q9NQE9 182 aaKnown RBP10.33□□□□□ -0.76
LINC00538-201ENST00000626109 DUSP22Q9NRW4 184 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 PEMTQ9UBM1 199 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 COPS7AQ9UBW8 275 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 NUFIP1Q9UHK0 495 aaKnown RBP10.33□□□□□ -0.76
LINC00538-201ENST00000626109 SCN2AQ99250 2005 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 J3QRE1 110 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 SLC43A1O75387 559 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 UPK3AO75631 287 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 CT62P0C5K7 136 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 CD8BP10966 210 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 EIF2S3P41091 472 aaKnown RBP10.33□□□□□ -0.76
LINC00538-201ENST00000626109 CAV3P56539 151 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 OR1Q1Q15612 314 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 ZNF791Q3KP31 576 aaPredicted RBP10.33□□□□□ -0.76
LINC00538-201ENST00000626109 HACD4Q5VWC8 232 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 HBMQ6B0K9 141 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 CYB5R2Q6BCY4 276 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 CFAP77Q6ZQR2 320 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 SMIM15Q7Z3B0 74 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 LRRC28Q86X40 367 aaPredicted RBP10.33□□□□□ -0.76
LINC00538-201ENST00000626109 DNAAF1Q8NEP3 725 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 SLC2A12Q8TD20 617 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 CTHRC1Q96CG8 243 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 SENP5Q96HI0 755 aaPredicted RBP10.33□□□□□ -0.76
LINC00538-201ENST00000626109 UBL7Q96S82 380 aaPredicted RBP10.33□□□□□ -0.76
LINC00538-201ENST00000626109 WDR77Q9BQA1 342 aaPredicted RBP10.33□□□□□ -0.76
LINC00538-201ENST00000626109 ZNF649Q9BS31 505 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 TRAF4Q9BUZ4 470 aaPredicted RBP10.33□□□□□ -0.76
LINC00538-201ENST00000626109 MS4A7Q9GZW8 240 aaPredicted RBP10.33□□□□□ -0.76
LINC00538-201ENST00000626109 SLC25A32Q9H2D1 315 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 WDR76Q9H967 626 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 MARCH7Q9H992 704 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 TMEM27Q9HBJ8 222 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 FBXL4Q9UKA2 621 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 NTNG1Q9Y2I2 539 aa10.33□□□□□ -0.76
LINC00538-201ENST00000626109 AHCTF1Q8WYP5 2266 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 A0A087WWL8 130 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 CLEC18AA5D8T8 446 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 RIIAD1A6NNX1 92 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 CDC42EP2O14613 210 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 NME2P1O60361 137 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 LALBAP00709 142 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 HPP00738 406 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 THY1P04216 161 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 C1QTNF9P0C862 333 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 IFI30P13284 250 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 RPS4Y1P22090 263 aaKnown RBP10.32□□□□□ -0.76
LINC00538-201ENST00000626109 SSTR4P31391 388 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 CLDN20P56880 219 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 PLAURQ03405 335 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 SLC3A1Q07837 685 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 FUT7Q11130 342 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 DUSP5Q16690 384 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 TATDN3Q17R31 274 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 TRMT12Q53H54 448 aaKnown RBP10.32□□□□□ -0.76
LINC00538-201ENST00000626109 DCST2Q5T1A1 773 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 ZNF57Q68EA5 555 aaPredicted RBP10.32□□□□□ -0.76
LINC00538-201ENST00000626109 NIPAL3Q6P499 406 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 CLEC18BQ6UXF7 455 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 PGAP1Q75T13 922 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 SPACA3Q8IXA5 215 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 BOD1L2Q8IYS8 172 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 COX18Q8N8Q8 333 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 CLEC18CQ8NCF0 446 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 OR5M3Q8NGP4 307 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 OR10J5Q8NHC4 309 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 NSMAFQ92636 917 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 CHMP1AQ9HD42 196 aaPredicted RBP10.32□□□□□ -0.76
LINC00538-201ENST00000626109 RANGRFQ9HD47 186 aaPredicted RBP10.32□□□□□ -0.76
LINC00538-201ENST00000626109 RAB18Q9NP72 206 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 RAB9BQ9NP90 201 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 CMC2Q9NRP2 79 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 UBE2J1Q9Y385 318 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms