RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 OR4A8P0C604 315 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 PGA4P0DJD7 388 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 PGA5P0DJD9 388 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 CYBAP13498 195 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 AKR1C4P17516 323 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 ZBTB25P24278 435 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 PFN3P60673 137 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 RPS11P62280 158 aaKnown RBP eCLIP7.13□□□□□ -1.27
VPS11-209ENST00000622309 SSBP1Q04837 148 aaKnown RBP7.13□□□□□ -1.27
VPS11-209ENST00000622309 PDE7AQ13946 482 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 LYPLAL1Q5VWZ2 237 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 CACUL1Q86Y37 369 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 ADGRL4Q9HBW9 690 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 HCSTQ9UBK5 93 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 RIIAD1A6NNX1 92 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 ZNF736B4DX44 427 aaPredicted RBP7.13□□□□□ -1.27
VPS11-209ENST00000622309 K7EPK0 472 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 RAB27BO00194 218 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 SCGB1D1O95968 90 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 WNT11O96014 354 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 PRH1P02810 166 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 IRF2P14316 349 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 SELEP16581 610 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 ACRV1P26436 265 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 CX3CR1P49238 355 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 NPY4RP50391 375 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 TAS2R38P59533 333 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 ERVFRD-1P60508 538 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 H3F3AP84243 136 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 REEP5Q00765 189 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 EIF2B1Q14232 305 aaKnown RBP7.13□□□□□ -1.27
VPS11-209ENST00000622309 C1orf189Q5VU69 101 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 CD300LGQ6UXG3 332 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 UNQ9370/PRO34162Q6UXP9 181 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 MRPL52Q86TS9 123 aaKnown RBP7.13□□□□□ -1.27
VPS11-209ENST00000622309 MRPL41Q8IXM3 137 aaKnown RBP7.13□□□□□ -1.27
VPS11-209ENST00000622309 TMEM86AQ8N2M4 240 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 FAM71E2Q8N5Q1 922 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 LMF1Q96S06 567 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 ZNF2Q9BSG1 426 aaPredicted RBP7.13□□□□□ -1.27
VPS11-209ENST00000622309 C1QTNF2Q9BXJ5 285 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 NMES1Q9C002 83 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 OR52D1Q9H346 318 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 PLEKHA2Q9HB19 425 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 FOXJ2Q9P0K8 574 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 ZFP30Q9Y2G7 519 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 MRPS2Q9Y399 296 aaKnown RBP7.13□□□□□ -1.27
VPS11-209ENST00000622309 A0A0D9SEW6 157 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 PRAMEF26H0Y7S4 382 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 H7C4K7 107 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 CST4P01036 141 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 FCARP24071 287 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 CORO1AP31146 461 aaKnown RBP7.12□□□□□ -1.27
VPS11-209ENST00000622309 CEACAM8P31997 349 aaPredicted RBP7.12□□□□□ -1.27
VPS11-209ENST00000622309 RAB35Q15286 201 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 FAM71E1Q6IPT2 247 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 PRSS54Q6PEW0 395 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 TEX38Q6PEX7 206 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 STAC2Q6ZMT1 411 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 ZNF836Q6ZNA1 936 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 MBOAT2Q6ZWT7 520 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 TMEM150AQ86TG1 271 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 SLC25A42Q86VD7 318 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 C1orf87Q8N0U7 546 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 TMEM229BQ8NBD8 167 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 OR2L3Q8NG85 312 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 OR5P2Q8WZ92 322 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 KISS1RQ969F8 398 aaPredicted RBP7.12□□□□□ -1.27
VPS11-209ENST00000622309 LGR4Q9BXB1 951 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 OR8D2Q9GZM6 311 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 CST11Q9H112 138 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 MYNNQ9NPC7 610 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 PADI1Q9ULC6 663 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 CDH23Q9H251 3354 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 A0A1B0GV50 99 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 SRPX2O60687 465 aaPredicted RBP7.12□□□□□ -1.27
VPS11-209ENST00000622309 MAS1P04201 325 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 GYPBP06028 91 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 BRS3P32247 399 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 SOX2P48431 317 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 LSSP48449 732 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 POLR2HP52434 150 aaKnown RBP7.12□□□□□ -1.27
VPS11-209ENST00000622309 SUCLG1P53597 346 aaKnown RBP7.12□□□□□ -1.27
VPS11-209ENST00000622309 ELOCQ15369 112 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 CHRFAM7AQ494W8 412 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 COL5A1-AS1Q5SY13 56 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 PRAMEF8Q5VWM4 474 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 PRAMEF7Q5VXH5 474 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 RNF219Q5W0B1 726 aaPredicted RBP7.12□□□□□ -1.27
VPS11-209ENST00000622309 ANKRD16Q6P6B7 361 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 SLC39A5Q6ZMH5 540 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 TMEM173Q86WV6 379 aaPredicted RBP7.12□□□□□ -1.27
VPS11-209ENST00000622309 ZNF683Q8IZ20 524 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 FAM160A2Q8N612 972 aaPredicted RBP7.12□□□□□ -1.27
VPS11-209ENST00000622309 TTC9BQ8N6N2 239 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 CYB561A3Q8NBI2 242 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 OR4S1Q8NGB4 309 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 OR4K15Q8NH41 348 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 ASB11Q8WXH4 323 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 KLK6Q92876 244 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms