RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 SLC5A7Q9GZV3 580 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 NELFAQ9H3P2 528 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 NOX4Q9NPH5 578 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 STEAP1Q9UHE8 339 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 FARSAQ9Y285 508 aaKnown RBP6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 A0A1W2PPK0 400 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 OTOL1A6NHN0 477 aaPredicted RBP6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 NKX6-3A6NJ46 265 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 ELOA3DA6NLF2 546 aaPredicted RBP6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 PPP5D1E7EU14 171 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 RAB27BO00194 218 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 CYB5BO43169 146 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 KLF4O43474 513 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 LATO43561 262 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 GPANK1O95872 356 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 WNT11O96014 354 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 PRNPP04156 253 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 THY1P04216 161 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 PCCBP05166 539 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 HMGN2P05204 90 aaKnown RBP6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 DCNP07585 359 aaKnown RBP6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 PET100P0DJ07 73 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 ADH5P11766 374 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 RAB6AP20340 208 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 BCL6P41182 706 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 SSR2P43308 183 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 KHKP50053 298 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 RPS15P62841 145 aaKnown RBP6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 LTBQ06643 244 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 DPTQ07507 201 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 SPOCK1Q08629 439 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 NUMA1Q14980 2115 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 NKAIN1Q4KMZ8 207 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 PRAMEF8Q5VWM4 474 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 PRAMEF7Q5VXH5 474 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 TANGO2Q6ICL3 276 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 OR4C11Q6IEV9 310 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 BTNL3Q6UXE8 466 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 AMZ2Q86W34 360 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 DND1Q8IYX4 353 aaKnown RBP6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 C1orf87Q8N0U7 546 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 CXorf40AQ8TE69 158 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 FRZBQ92765 325 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 CNRIP1Q96F85 164 aaPredicted RBP6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 COX14Q96I36 57 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 SERINC1Q9NRX5 453 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 SLC2A8Q9NY64 477 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 HAO2Q9NYQ3 351 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 FBXO4Q9UKT5 387 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 YBX2Q9Y2T7 364 aaKnown RBP6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 HS3ST3B1Q9Y662 390 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 A0A1W2PR48 441 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 ZC3H12DA2A288 527 aaKnown RBP6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 PLRG1O43660 514 aaKnown RBP6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 ERAL1O75616 437 aaKnown RBP6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 TXNDC12O95881 172 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 CST4P01036 141 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 IRF2P14316 349 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 PNLIPP16233 465 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 CXCR1P25024 350 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 PRSS3P35030 304 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 GPR4P46093 362 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 SLC37A1P57057 533 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 FAM3AP98173 230 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 PAX5Q02548 391 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 MLC1Q15049 377 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 NR0B2Q15466 257 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 MLF2Q15773 248 aaPredicted RBP6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 DUSP5Q16690 384 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 GAB4Q2WGN9 574 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 MIDNQ504T8 468 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 PRRT3Q5FWE3 981 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 COL5A1-AS1Q5SY13 56 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 PIP5KL1Q5T9C9 394 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 OGFOD3Q6PK18 319 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 SPRED2Q7Z698 418 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 RPS4Y2Q8TD47 263 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 GPX8Q8TED1 209 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 ABHD5Q8WTS1 349 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 DIO2Q92813 273 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 ZNF764Q96H86 408 aaPredicted RBP6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 ZNF514Q96K75 400 aaPredicted RBP6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 C5orf34Q96MH7 638 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 SMAD5Q99717 465 aaKnown RBP6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 ARHGDIGQ99819 225 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 RNF126Q9BV68 326 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 PARD6GQ9BYG4 376 aaPredicted RBP6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 TRIM2Q9C040 744 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 SLCO5A1Q9H2Y9 848 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 C6orf106Q9H6K1 298 aaPredicted RBP6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 METTL8Q9H825 291 aaKnown RBP6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 ADGRL4Q9HBW9 690 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 BCL2L10Q9HD36 194 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 OR2S2Q9NQN1 319 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 GPR34Q9UPC5 381 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 CDH23Q9H251 3354 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 CHD9Q3L8U1 2897 aa6.73□□□□□ -1.33
TRIM49B-202ENST00000622138 TRBV11-1A0A0K0K1C0 115 aa6.72□□□□□ -1.33
TRIM49B-202ENST00000622138 CENPVL1A0A0U1RR11 272 aa6.72□□□□□ -1.33
TRIM49B-202ENST00000622138 C20orf202A1L168 122 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms