RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 PGAP1Q75T13 922 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 TMEM151BQ8IW70 566 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 DMBX1Q8NFW5 382 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 ROBO4Q8WZ75 1007 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 TCTN2Q96GX1 697 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 ZNF285Q96NJ3 590 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 ZFP57Q9NU63 452 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 MSGN1A6NI15 193 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 IGKV3-11P04433 115 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 HOXB1P14653 301 aaPredicted RBP17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 ZNF823P16415 610 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 IL12BP29460 328 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 POLR2HP52434 150 aaKnown RBP17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 SLC26A5P58743 744 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 FMODQ06828 376 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 PJVKQ0ZLH3 352 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 PCK2Q16822 640 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 DRAM2Q6UX65 266 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 GLYATL2Q8WU03 294 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 CDC6Q99741 560 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 OR11A1Q9GZK7 315 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 PTGES2Q9H7Z7 377 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 CERS4Q9HA82 394 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 B4DGG1 531 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 DDAH2O95865 285 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 SPP1P10451 314 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 ABOP16442 354 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 RABIFP47224 123 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 CYCSP99999 105 aaKnown RBP17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 PTCRAQ6ISU1 281 aaPredicted RBP17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 OR2I1PQ8NGU4 316 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 LILRB1Q8NHL6 650 aaPredicted RBP17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 ZNF721Q8TF20 911 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 TSLPQ969D9 159 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 A0A1W2PQD3 144 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 A8MVM7 634 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 ALG1L2C9J202 215 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 CA3P07451 260 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 SLC6A9P48067 706 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 WDFY1Q8IWB7 410 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 KDM8Q8N371 416 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 SLC22A24Q8N4F4 322 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 BHLHE23Q8NDY6 225 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 OR10R2Q8NGX6 335 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 RXFP4Q8TDU9 374 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 ADAT3Q96EY9 351 aaPredicted RBP17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 IGFLR1Q9H665 355 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 LPAR3Q9UBY5 353 aa17.44■□□□□ 0.38
PDLIM3-212ENST00000620787 TSPAN2O60636 221 aa17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 CRYBA1P05813 215 aa17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 HEXAP06865 529 aa17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 SGCAQ16586 387 aa17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 OR4K15Q8NH41 348 aa17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 TMEM230Q96A57 120 aa17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 CMSS1Q9BQ75 279 aaKnown RBP17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 NRIP2Q9BQI9 281 aa17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 FAM96BQ9Y3D0 163 aa17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 KNL1Q8NG31 2342 aa17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 MEX3AA1L020 520 aaKnown RBP17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 ZNF705EA8MWA4 302 aaPredicted RBP17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 OR2T1O43869 369 aa17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 LYL1P12980 280 aa17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 IL11P20809 199 aa17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 GNALP38405 381 aa17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 TMEM128Q5BJH2 165 aa17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 AVPI1Q5T686 147 aa17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 NUDT16L1Q9BRJ7 211 aaKnown RBP17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 UQCC2Q9BRT2 126 aa17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 FAM206AQ9NX38 181 aa17.43■□□□□ 0.38
PDLIM3-212ENST00000620787 IGKV1D-43A0A0B4J1Z2 117 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 ZNF217O75362 1048 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 TTRP02766 147 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 NFYBP25208 207 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 KCNJ3P48549 501 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 GSK3AP49840 483 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 MEOX2P50222 304 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 MMP16P51512 607 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 GFOD2Q3B7J2 385 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 DEGS2Q6QHC5 323 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 TMEM92Q6UXU6 159 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 NICN1Q9BSH3 213 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 TBL1XR1Q9BZK7 514 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 C5orf66Q9H5L9 145 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 CENPMQ9NSP4 180 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 OR5AC2Q9NZP5 309 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 RCC2Q9P258 522 aaKnown RBP17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 FBLN5Q9UBX5 448 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 SLC5A6Q9Y289 635 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 TMEM14DPA8MWL7 114 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 H0YIG0 161 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 SOX1O00570 391 aaPredicted RBP17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 ADAP1O75689 374 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 SCGNO76038 276 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 H2BFMP0C1H6 154 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 CTSEP14091 401 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 MUC1P15941 1255 aaPredicted RBP17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 PDZK1IP1Q13113 114 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 FZD2Q14332 565 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 EBPQ15125 230 aaKnown RBP17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 ZNF585AQ6P3V2 769 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms