RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 XRCC3O43542 346 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 MNDAP41218 407 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 PPIAP62937 165 aaKnown RBP15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 FAM27BQ5VT28 67 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 ZNF813Q6ZN06 617 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 OR6F1Q8NGZ6 308 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 INMT-MINDY4F8WBC2 141 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 TNFRSF10AO00220 468 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 ARSBP15848 533 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 ABOP16442 354 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 CTSSP25774 331 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 BDKRB2P30411 391 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 RSPO1Q2MKA7 263 aaPredicted RBP15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 ELFN2Q5R3F8 820 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 LYPD6Q86Y78 171 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 NKAIN3Q8N8D7 197 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 OR1M1Q8NGA1 313 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 OR13C9Q8NGT0 318 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 CREB3L1Q96BA8 519 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 TMEM38BQ9NVV0 291 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 PLEK2Q9NYT0 353 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 MYEF2Q9P2K5 600 aaKnown RBP15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 LOC390937A0A1W2PQ73 354 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 GGT3PA6NGU5 568 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 HMX3A6NHT5 357 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 KLRC4-KLRK1H3BQV0 150 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 DBHP09172 617 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 LIPCP11150 499 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 CD46P15529 392 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 ZNF708P17019 499 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 ZNF20P17024 532 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 GIFP27352 417 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 SLC6A9P48067 706 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 RRADP55042 308 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 C1orf100Q5SVJ3 147 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 OR52N4Q8NGI2 321 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 OR4D6Q8NGJ1 314 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 PGAM5Q96HS1 289 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 RHBDD3Q9Y3P4 386 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 PTPRBP23467 1997 aa15.24■□□□□ 0.03
PCDHGC3-205ENST00000617641 CIB4A0PJX0 185 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 B4GALT1P15291 398 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 WT1P19544 449 aaPredicted RBP15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 CCR6P51684 374 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 ARG2P78540 354 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 SNTB2Q13425 540 aaKnown RBP15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 DYRK1AQ13627 763 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 TBRG1Q3YBR2 411 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 TMPRSS7Q7RTY8 843 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 OR5D14Q8NGL3 314 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 CPT1CQ8TCG5 803 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 GAL3ST1Q99999 423 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 ATG5Q9H1Y0 275 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 DPAGT1Q9H3H5 408 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 DIABLOQ9NR28 239 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 RBMX2Q9Y388 322 aaKnown RBP15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 TRAV6A0A075B6T7 132 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 ACOT7O00154 380 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 SDHBP21912 280 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 MRPS10P82664 201 aaKnown RBP15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 C3AR1Q16581 482 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 CEACAM16Q2WEN9 425 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 OR10K2Q6IF99 312 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 MEIOBQ8N635 442 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 SORCS2Q96PQ0 1159 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 ZNF552Q9H707 407 aaPredicted RBP15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 CNTD2Q9H8S5 307 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 TMEM138Q9NPI0 162 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 SLC17A5Q9NRA2 495 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 NUDT15Q9NV35 164 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 PAIP2BQ9ULR5 123 aaKnown RBP15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 LIPGQ9Y5X9 500 aa15.23■□□□□ 0.03
PCDHGC3-205ENST00000617641 TRAV18A0A075B6X5 111 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 IGHV3-9P01782 118 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 RAB3AP20336 220 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 CCL1P22362 96 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 ATAD3CQ5T2N8 411 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 ZNF529Q6P280 563 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 ADGRE4PQ86SQ3 457 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 ZBTB8BQ8NAP8 495 aaPredicted RBP15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 ZFP62Q8NB50 900 aaPredicted RBP15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 ST6GAL2Q96JF0 529 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 LYZL4Q96KX0 146 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 C7orf50Q9BRJ6 194 aaKnown RBP15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 CACNG6Q9BXT2 260 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 GPR35Q9HC97 309 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 NOSIPQ9Y314 301 aaKnown RBP15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 CSAG2Q9Y5P2 127 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 ZNF407Q9C0G0 2248 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 TCRBP04435 133 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 PATE4P0C8F1 98 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 NKX2-5P52952 324 aaPredicted RBP15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 SOX8P57073 446 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 CBX3Q13185 183 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 RSPO4Q2I0M5 234 aaPredicted RBP15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 ZNF766Q5HY98 468 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 TMEM255AQ5JRV8 349 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 DOK3Q7L591 496 aa15.22■□□□□ 0.03
PCDHGC3-205ENST00000617641 FNDC9Q8TBE3 224 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms