RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 CDCP2Q5VXM1 449 aa13.07□□□□□ -0.32
CDH1-213ENST00000612417 OR8S1Q8NH09 359 aa13.07□□□□□ -0.32
CDH1-213ENST00000612417 PCNPQ8WW12 178 aaKnown RBP13.07□□□□□ -0.32
CDH1-213ENST00000612417 DVL3Q92997 716 aaPredicted RBP13.07□□□□□ -0.32
CDH1-213ENST00000612417 ZNF700Q9H0M5 742 aa13.07□□□□□ -0.32
CDH1-213ENST00000612417 PARD6AQ9NPB6 346 aa13.07□□□□□ -0.32
CDH1-213ENST00000612417 KLHL13Q9P2N7 655 aa13.07□□□□□ -0.32
CDH1-213ENST00000612417 TMEM82A0PJX8 343 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 C2orf72A6NCS6 295 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 ARPC5O15511 151 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 RP2O75695 350 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 SIX6O95475 246 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 ZNF250P15622 560 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 PPP3CBP16298 524 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 GMFBP60983 142 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 DCAF12L2Q5VW00 463 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 LRFN4Q6PJG9 635 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 TMUB2Q71RG4 321 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 ZNF627Q7L945 461 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 WDFY1Q8IWB7 410 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 DDIT4LQ96D03 193 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 NKX3-1Q99801 234 aaPredicted RBP13.06□□□□□ -0.32
CDH1-213ENST00000612417 DDA1Q9BW61 102 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 CHST6Q9GZX3 395 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 POFUT1Q9H488 388 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 HS3ST3B1Q9Y662 390 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 CCDC187A0A096LP49 1063 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 A0A1W2PNV4 684 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 DCDC2BA2VCK2 349 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 CYB5AP00167 134 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 CELA2AP08217 269 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 CD63P08962 238 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 OR4E1P0C645 316 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 ZNF735P0CB33 412 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 GPR85P60893 370 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 RPS18P62269 152 aaKnown RBP13.06□□□□□ -0.32
CDH1-213ENST00000612417 POU3F1Q03052 451 aaPredicted RBP13.06□□□□□ -0.32
CDH1-213ENST00000612417 TLE3Q04726 772 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 SPOCK1Q08629 439 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 STK11Q15831 433 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 C4orf46Q504U0 113 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 HES3Q5TGS1 186 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 TMEM164Q5U3C3 297 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 RAB12Q6IQ22 244 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 TIPARPQ7Z3E1 657 aaKnown RBP13.06□□□□□ -0.32
CDH1-213ENST00000612417 GALNT16Q8N428 558 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 JAGN1Q8N5M9 183 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 SLC22A8Q8TCC7 542 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 CT55Q8WUE5 264 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 RBPMSQ93062 196 aaKnown RBP13.06□□□□□ -0.32
CDH1-213ENST00000612417 TMEM138Q9NPI0 162 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 DCAF16Q9NXF7 216 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 ALKBH4Q9NXW9 302 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 MED11Q9P086 117 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 B3GALT5Q9Y2C3 310 aa13.06□□□□□ -0.32
CDH1-213ENST00000612417 SDK2Q58EX2 2172 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 IGKV1D-43A0A0B4J1Z2 117 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 hCG_1807616A0A1W2PRN6 198 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 LIPT2A6NK58 231 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 COX6A1P12074 109 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 RPA2P15927 270 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 OTX2P32243 289 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 UBE2MP61081 183 aaKnown RBP13.05□□□□□ -0.32
CDH1-213ENST00000612417 OC90Q02509 493 aaPredicted RBP13.05□□□□□ -0.32
CDH1-213ENST00000612417 EXT1Q16394 746 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 SLC25A53Q5H9E4 307 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 ZNF813Q6ZN06 617 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 CHMP1BQ7LBR1 199 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 GPAT4Q86UL3 456 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 LINC00346Q8IVM7 164 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 ELP5Q8TE02 316 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 SCARB1Q8WTV0 552 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 AQP3Q92482 292 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 FAM206AQ9NX38 181 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 SLC2A8Q9NY64 477 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 KLRF1Q9NZS2 232 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 PCDHGA1Q9Y5H4 931 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 AHCTF1Q8WYP5 2266 aa13.05□□□□□ -0.32
CDH1-213ENST00000612417 NSG1A0A0A6YYJ2 146 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 ZNF736B4DX44 427 aaPredicted RBP13.04□□□□□ -0.32
CDH1-213ENST00000612417 C9orf172C9J069 976 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 BET1O15155 118 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 IGHEP01854 428 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 AMY2AP04746 511 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 NMBP08949 121 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 H2BFMP0C1H6 154 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 MPZP25189 248 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 HSD11B1P28845 292 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 FOXF1Q12946 379 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 ARSKQ6UWY0 536 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 GLRX5Q86SX6 157 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 OR4D6Q8NGJ1 314 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 REG4Q9BYZ8 158 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 TINAGL1Q9GZM7 467 aaPredicted RBP13.04□□□□□ -0.32
CDH1-213ENST00000612417 ZNF160Q9HCG1 818 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 FAM86C1Q9NVL1 165 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 MED29Q9NX70 200 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 RDH8Q9NYR8 311 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 GDF2Q9UK05 429 aaPredicted RBP13.04□□□□□ -0.32
CDH1-213ENST00000612417 KLK13Q9UKR3 277 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms