RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 TUSC1Q2TAM9 212 aa12.4□□□□□ -0.42
CTSA-216ENST00000607212 SLC36A3Q495N2 470 aa12.4□□□□□ -0.42
CTSA-216ENST00000607212 ZNF362Q5T0B9 420 aaPredicted RBP12.4□□□□□ -0.42
CTSA-216ENST00000607212 WDR25Q64LD2 544 aaPredicted RBP12.4□□□□□ -0.42
CTSA-216ENST00000607212 SLC15A3Q8IY34 581 aa12.4□□□□□ -0.42
CTSA-216ENST00000607212 FITM2Q8N6M3 262 aa12.4□□□□□ -0.42
CTSA-216ENST00000607212 OR52J3Q8NH60 311 aa12.4□□□□□ -0.42
CTSA-216ENST00000607212 FANK1Q8TC84 345 aa12.4□□□□□ -0.42
CTSA-216ENST00000607212 SLCO4A1Q96BD0 722 aa12.4□□□□□ -0.42
CTSA-216ENST00000607212 ERVK-18Q9QC07 812 aa12.4□□□□□ -0.42
CTSA-216ENST00000607212 SIGLEC7Q9Y286 467 aa12.4□□□□□ -0.42
CTSA-216ENST00000607212 LHFPL6Q9Y693 200 aa12.4□□□□□ -0.42
CTSA-216ENST00000607212 A0A1B0GUS0 222 aa12.39□□□□□ -0.43
CTSA-216ENST00000607212 PTP4A3O75365 173 aa12.39□□□□□ -0.43
CTSA-216ENST00000607212 GGT2P36268 569 aa12.39□□□□□ -0.43
CTSA-216ENST00000607212 MDH1P40925 334 aaKnown RBP12.39□□□□□ -0.43
CTSA-216ENST00000607212 PMELP40967 661 aa12.39□□□□□ -0.43
CTSA-216ENST00000607212 GSK3BP49841 420 aa12.39□□□□□ -0.43
CTSA-216ENST00000607212 SRSF4Q08170 494 aaKnown RBP12.39□□□□□ -0.43
CTSA-216ENST00000607212 ZNF181Q2M3W8 571 aa12.39□□□□□ -0.43
CTSA-216ENST00000607212 SFRP4Q6FHJ7 346 aaPredicted RBP12.39□□□□□ -0.43
CTSA-216ENST00000607212 SMARCD3Q6STE5 483 aa12.39□□□□□ -0.43
CTSA-216ENST00000607212 PGAP1Q75T13 922 aa12.39□□□□□ -0.43
CTSA-216ENST00000607212 SCCPDHQ8NBX0 429 aa12.39□□□□□ -0.43
CTSA-216ENST00000607212 RP9Q8TA86 221 aaKnown RBP12.39□□□□□ -0.43
CTSA-216ENST00000607212 GPX7Q96SL4 187 aaPredicted RBP12.39□□□□□ -0.43
CTSA-216ENST00000607212 IFT27Q9BW83 186 aa12.39□□□□□ -0.43
CTSA-216ENST00000607212 VIPAS39Q9H9C1 493 aa12.39□□□□□ -0.43
CTSA-216ENST00000607212 FN3KRPQ9HA64 309 aa12.39□□□□□ -0.43
CTSA-216ENST00000607212 B9D1Q9UPM9 204 aa12.39□□□□□ -0.43
CTSA-216ENST00000607212 V9GYQ6 96 aa12.39□□□□□ -0.43
CTSA-216ENST00000607212 GGT3PA6NGU5 568 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 A6NLC8 198 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 C3orf80F5H4A9 247 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 P2RY10O00398 339 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 NME4O00746 187 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 ADAM20O43506 726 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 TOX4O94842 621 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 DIRAS1O95057 198 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 COX4I1P13073 169 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 SLC6A6P31641 620 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 OMPP47874 163 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 TPTEP56180 551 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 GK2Q14410 553 aaPredicted RBP12.38□□□□□ -0.43
CTSA-216ENST00000607212 KCNMB1Q16558 191 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 METTL11BQ5VVY1 283 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 CD276Q5ZPR3 534 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 OLFML2AQ68BL7 652 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 LNX2Q8N448 690 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 OR4K13Q8NH42 304 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 GATAD2BQ8WXI9 593 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 UBE2FQ969M7 185 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 ERGIC1Q969X5 290 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 NMNAT3Q96T66 252 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 ATF6BQ99941 703 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 HOPXQ9BPY8 73 aaPredicted RBP12.38□□□□□ -0.43
CTSA-216ENST00000607212 ADAT1Q9BUB4 502 aaKnown RBP12.38□□□□□ -0.43
CTSA-216ENST00000607212 FN3KQ9H479 309 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 NOX4Q9NPH5 578 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 RPRD1BQ9NQG5 326 aaKnown RBP12.38□□□□□ -0.43
CTSA-216ENST00000607212 RNF7Q9UBF6 113 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 NOP16Q9Y3C1 178 aaKnown RBP12.38□□□□□ -0.43
CTSA-216ENST00000607212 N6AMT1Q9Y5N5 214 aa12.38□□□□□ -0.43
CTSA-216ENST00000607212 TRBV4-1A0A0J9YWV2 114 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 hCG_1807616A0A1W2PRN6 198 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 A0A1W2PRQ8 180 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 C22orf46C9J442 243 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 M0QZ24 198 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 DCTN6O00399 190 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 NDUFAB1O14561 156 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 SLC22A2O15244 555 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 SFTPBP07988 381 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 ACSM4P0C7M7 580 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 ZNF823P16415 610 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 RHCEP18577 417 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 CA6P23280 308 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 CFHR2P36980 270 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 NPY4RP50391 375 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 NUDT2P50583 147 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 SPIBQ01892 262 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 COX10Q12887 443 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 TRAP1Q12931 704 aaKnown RBP12.37□□□□□ -0.43
CTSA-216ENST00000607212 ECH1Q13011 328 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 MAB21L1Q13394 359 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 DGCR6Q14129 220 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 MPPED2Q15777 294 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 SLC18B1Q6NT16 456 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 CGB2Q6NT52 195 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 Q6YL49 198 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 CFAP77Q6ZQR2 320 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 CELF2-AS1Q8N7Q2 184 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 WFDC12Q8WWY7 111 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 LHX4Q969G2 390 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 SPTSSAQ969W0 71 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 FAM71F1Q96KD3 344 aaPredicted RBP12.37□□□□□ -0.43
CTSA-216ENST00000607212 CHIAQ9BZP6 476 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 EFCAB1Q9HAE3 211 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.37□□□□□ -0.43
CTSA-216ENST00000607212 MMP24Q9Y5R2 645 aa12.37□□□□□ -0.43
CTSA-216ENST00000607212 IGLV1-36A0A0B4J1U3 117 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms