RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 ACSM4P0C7M7 580 aa20.33■□□□□ 0.85
SNX5-219ENST00000606602 IRF2P14316 349 aa20.33■□□□□ 0.85
SNX5-219ENST00000606602 HIST1H1CP16403 213 aaKnown RBP20.33■□□□□ 0.85
SNX5-219ENST00000606602 PITPNBP48739 271 aa20.33■□□□□ 0.85
SNX5-219ENST00000606602 ECH1Q13011 328 aa20.33■□□□□ 0.85
SNX5-219ENST00000606602 GK2Q14410 553 aaPredicted RBP20.33■□□□□ 0.85
SNX5-219ENST00000606602 SLC9A3R2Q15599 337 aa20.33■□□□□ 0.85
SNX5-219ENST00000606602 KRTAP27-1Q3LI81 207 aa20.33■□□□□ 0.85
SNX5-219ENST00000606602 PRR31Q5SQ13 230 aa20.33■□□□□ 0.85
SNX5-219ENST00000606602 SLC18B1Q6NT16 456 aa20.33■□□□□ 0.85
SNX5-219ENST00000606602 OR2AJ1Q8NGZ0 328 aa20.33■□□□□ 0.85
SNX5-219ENST00000606602 ATF6BQ99941 703 aa20.33■□□□□ 0.85
SNX5-219ENST00000606602 FAM107BQ9H098 131 aa20.33■□□□□ 0.85
SNX5-219ENST00000606602 TRAV40A0A0B4J280 105 aa20.32■□□□□ 0.84
SNX5-219ENST00000606602 A0A1B0GWJ7 208 aa20.32■□□□□ 0.84
SNX5-219ENST00000606602 CLDN34H7C241 214 aa20.32■□□□□ 0.84
SNX5-219ENST00000606602 ARPC3O15145 178 aa20.32■□□□□ 0.84
SNX5-219ENST00000606602 FSTL3O95633 263 aa20.32■□□□□ 0.84
SNX5-219ENST00000606602 HLA-DQA2P01906 255 aa20.32■□□□□ 0.84
SNX5-219ENST00000606602 LCATP04180 440 aa20.32■□□□□ 0.84
SNX5-219ENST00000606602 NOS3P29474 1203 aa20.32■□□□□ 0.84
SNX5-219ENST00000606602 SPIBQ01892 262 aa20.32■□□□□ 0.84
SNX5-219ENST00000606602 MALLQ13021 153 aa20.32■□□□□ 0.84
SNX5-219ENST00000606602 C9orf139Q6ZV77 190 aa20.32■□□□□ 0.84
SNX5-219ENST00000606602 NAA40Q86UY6 237 aa20.32■□□□□ 0.84
SNX5-219ENST00000606602 NSRP1Q9H0G5 558 aaKnown RBP20.32■□□□□ 0.84
SNX5-219ENST00000606602 UNKLQ9H9P5 680 aaKnown RBP20.32■□□□□ 0.84
SNX5-219ENST00000606602 KIR2DS1A0A191URI9 304 aa20.31■□□□□ 0.84
SNX5-219ENST00000606602 PLATP00750 562 aa20.31■□□□□ 0.84
SNX5-219ENST00000606602 GATA4P43694 442 aa20.31■□□□□ 0.84
SNX5-219ENST00000606602 TRAP1Q12931 704 aaKnown RBP20.31■□□□□ 0.84
SNX5-219ENST00000606602 MAB21L1Q13394 359 aa20.31■□□□□ 0.84
SNX5-219ENST00000606602 ZBTB46Q86UZ6 589 aa20.31■□□□□ 0.84
SNX5-219ENST00000606602 OR11L1Q8NGX0 322 aa20.31■□□□□ 0.84
SNX5-219ENST00000606602 DACT3Q96B18 629 aaPredicted RBP20.31■□□□□ 0.84
SNX5-219ENST00000606602 SLCO4A1Q96BD0 722 aa20.31■□□□□ 0.84
SNX5-219ENST00000606602 PYURFQ96I23 114 aa20.31■□□□□ 0.84
SNX5-219ENST00000606602 FN3KQ9H479 309 aa20.31■□□□□ 0.84
SNX5-219ENST00000606602 ZNF696Q9H7X3 374 aa20.31■□□□□ 0.84
SNX5-219ENST00000606602 GORASP2Q9H8Y8 452 aa20.31■□□□□ 0.84
SNX5-219ENST00000606602 CLN8Q9UBY8 286 aa20.31■□□□□ 0.84
SNX5-219ENST00000606602 CYB5R1Q9UHQ9 305 aa20.31■□□□□ 0.84
SNX5-219ENST00000606602 PKD1L1Q8TDX9 2849 aa20.31■□□□□ 0.84
SNX5-219ENST00000606602 OR10H3O60404 316 aa20.3■□□□□ 0.84
SNX5-219ENST00000606602 SNX3O60493 162 aa20.3■□□□□ 0.84
SNX5-219ENST00000606602 IL13RA1P78552 427 aa20.3■□□□□ 0.84
SNX5-219ENST00000606602 LYPD2Q6UXB3 125 aa20.3■□□□□ 0.84
SNX5-219ENST00000606602 DCDC5Q6ZRR9 648 aa20.3■□□□□ 0.84
SNX5-219ENST00000606602 PGAP1Q75T13 922 aa20.3■□□□□ 0.84
SNX5-219ENST00000606602 CPLX4Q7Z7G2 160 aa20.3■□□□□ 0.84
SNX5-219ENST00000606602 CELF2-AS1Q8N7Q2 184 aa20.3■□□□□ 0.84
SNX5-219ENST00000606602 C19orf18Q8NEA5 215 aa20.3■□□□□ 0.84
SNX5-219ENST00000606602 SDR9C7Q8NEX9 313 aa20.3■□□□□ 0.84
SNX5-219ENST00000606602 SPRYD4Q8WW59 207 aaPredicted RBP20.3■□□□□ 0.84
SNX5-219ENST00000606602 TAF15Q92804 592 aaKnown RBP eCLIP20.3■□□□□ 0.84
SNX5-219ENST00000606602 NUDT16L1Q9BRJ7 211 aaKnown RBP20.3■□□□□ 0.84
SNX5-219ENST00000606602 UFSP2Q9NUQ7 469 aa20.3■□□□□ 0.84
SNX5-219ENST00000606602 OR6C68A6NDL8 312 aa20.29■□□□□ 0.84
SNX5-219ENST00000606602 FAM20BO75063 409 aa20.29■□□□□ 0.84
SNX5-219ENST00000606602 GGT2P36268 569 aa20.29■□□□□ 0.84
SNX5-219ENST00000606602 TPTEP56180 551 aa20.29■□□□□ 0.84
SNX5-219ENST00000606602 PRAMEF6Q5VXH4 476 aa20.29■□□□□ 0.84
SNX5-219ENST00000606602 WDR25Q64LD2 544 aaPredicted RBP20.29■□□□□ 0.84
SNX5-219ENST00000606602 Q8TCH9 128 aa20.29■□□□□ 0.84
SNX5-219ENST00000606602 ERGIC1Q969X5 290 aa20.29■□□□□ 0.84
SNX5-219ENST00000606602 MYLK2Q9H1R3 596 aa20.29■□□□□ 0.84
SNX5-219ENST00000606602 PNRC2Q9NPJ4 139 aaKnown RBP20.29■□□□□ 0.84
SNX5-219ENST00000606602 MDFIC2A0A1B0GVS7 189 aa20.28■□□□□ 0.84
SNX5-219ENST00000606602 POM121CA8CG34 1229 aa20.28■□□□□ 0.84
SNX5-219ENST00000606602 IDH3BO43837 385 aa20.28■□□□□ 0.84
SNX5-219ENST00000606602 SEMG1P04279 462 aa20.28■□□□□ 0.84
SNX5-219ENST00000606602 PRDX6P30041 224 aa20.28■□□□□ 0.84
SNX5-219ENST00000606602 IFNGR2P38484 337 aa20.28■□□□□ 0.84
SNX5-219ENST00000606602 CD200P41217 278 aa20.28■□□□□ 0.84
SNX5-219ENST00000606602 OR8G1Q15617 311 aa20.28■□□□□ 0.84
SNX5-219ENST00000606602 CLEC12AQ5QGZ9 265 aa20.28■□□□□ 0.84
SNX5-219ENST00000606602 SLC35F1Q5T1Q4 408 aa20.28■□□□□ 0.84
SNX5-219ENST00000606602 MRPL21Q7Z2W9 205 aaKnown RBP20.28■□□□□ 0.84
SNX5-219ENST00000606602 FITM2Q8N6M3 262 aa20.28■□□□□ 0.84
SNX5-219ENST00000606602 OR10S1Q8NGN2 331 aa20.28■□□□□ 0.84
SNX5-219ENST00000606602 MCUR1Q96AQ8 359 aa20.28■□□□□ 0.84
SNX5-219ENST00000606602 TMCC3Q9ULS5 477 aa20.28■□□□□ 0.84
SNX5-219ENST00000606602 PHYHO14832 338 aa20.27■□□□□ 0.84
SNX5-219ENST00000606602 CA6P23280 308 aa20.27■□□□□ 0.84
SNX5-219ENST00000606602 RAD23AP54725 363 aa20.27■□□□□ 0.84
SNX5-219ENST00000606602 FGF12P61328 243 aa20.27■□□□□ 0.84
SNX5-219ENST00000606602 MPPED2Q15777 294 aa20.27■□□□□ 0.84
SNX5-219ENST00000606602 BRD3OSQ6XYD6 125 aa20.27■□□□□ 0.84
SNX5-219ENST00000606602 PIGWQ7Z7B1 504 aa20.27■□□□□ 0.84
SNX5-219ENST00000606602 SPTSSAQ969W0 71 aa20.27■□□□□ 0.84
SNX5-219ENST00000606602 MAP6Q96JE9 813 aa20.27■□□□□ 0.84
SNX5-219ENST00000606602 MRPL22Q9NWU5 206 aaKnown RBP20.27■□□□□ 0.84
SNX5-219ENST00000606602 MAGEL2Q9UJ55 1249 aa20.27■□□□□ 0.84
SNX5-219ENST00000606602 M0R135 149 aa20.26■□□□□ 0.83
SNX5-219ENST00000606602 HOXA3O43365 443 aaPredicted RBP20.26■□□□□ 0.83
SNX5-219ENST00000606602 ZNF823P16415 610 aa20.26■□□□□ 0.83
SNX5-219ENST00000606602 RRM2P31350 389 aa20.26■□□□□ 0.83
SNX5-219ENST00000606602 GSSP48637 474 aa20.26■□□□□ 0.83
SNX5-219ENST00000606602 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.26■□□□□ 0.83
SNX5-219ENST00000606602 DEFB112Q30KQ8 113 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms