RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 CASP6P55212 293 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 UBE2NP61088 152 aaKnown RBP15.7■□□□□ 0.1
VRK3-225ENST00000601912 PMPCAQ10713 525 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 P2RY6Q15077 328 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 LINC00299Q6ZSB3 139 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 PRSS45Q7RTY3 260 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 COMMD2Q86X83 199 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 GABRG1Q8N1C3 465 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 C1orf162Q8NEQ5 155 aaPredicted RBP15.7■□□□□ 0.1
VRK3-225ENST00000601912 OR52H1Q8NGJ2 320 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 OR13C3Q8NGS6 347 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 AP3S1Q92572 193 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 OPN3Q9H1Y3 402 aaPredicted RBP15.7■□□□□ 0.1
VRK3-225ENST00000601912 TCF7L1Q9HCS4 588 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 PIN1P1O15428 100 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 HOXC12P31275 282 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 GSG1Q2KHT4 349 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 KRTAP27-1Q3LI81 207 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 CROCCP3Q8IVE0 287 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 TBC1D15Q8TC07 691 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 OR51E1Q8TCB6 317 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 ASB5Q8WWX0 329 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 BARHL1Q9BZE3 327 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 C6orf62Q9GZU0 229 aaPredicted RBP15.7■□□□□ 0.1
VRK3-225ENST00000601912 NXF2Q9GZY0 626 aaKnown RBP15.7■□□□□ 0.1
VRK3-225ENST00000601912 OR10A2Q9H208 303 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 CXorf56Q9H5V9 222 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 CRNNQ9UBG3 495 aaPredicted RBP15.7■□□□□ 0.1
VRK3-225ENST00000601912 ZZEF1O43149 2961 aa15.69■□□□□ 0.1
VRK3-225ENST00000601912 INTS1Q8N201 2190 aaKnown RBP15.69■□□□□ 0.1
VRK3-225ENST00000601912 BSNQ9UPA5 3926 aa15.69■□□□□ 0.1
VRK3-225ENST00000601912 TRBV5-7A0A0A0MS05 114 aa15.69■□□□□ 0.1
VRK3-225ENST00000601912 IQCMA0A1B0GVH7 501 aa15.69■□□□□ 0.1
VRK3-225ENST00000601912 SMIM30A4D0T7 59 aa15.69■□□□□ 0.1
VRK3-225ENST00000601912 PDCD5O14737 125 aa15.69■□□□□ 0.1
VRK3-225ENST00000601912 TBX1O43435 398 aa15.69■□□□□ 0.1
VRK3-225ENST00000601912 RAB3BP20337 219 aa15.69■□□□□ 0.1
VRK3-225ENST00000601912 GABRA6Q16445 453 aa15.69■□□□□ 0.1
VRK3-225ENST00000601912 NAA40Q86UY6 237 aa15.69■□□□□ 0.1
VRK3-225ENST00000601912 ST6GALNAC3Q8NDV1 305 aa15.69■□□□□ 0.1
VRK3-225ENST00000601912 CPEB3Q8NE35 698 aaKnown RBP15.69■□□□□ 0.1
VRK3-225ENST00000601912 BOD1Q96IK1 185 aa15.69■□□□□ 0.1
VRK3-225ENST00000601912 KCNS3Q9BQ31 491 aa15.69■□□□□ 0.1
VRK3-225ENST00000601912 CKLFQ9UBR5 152 aa15.69■□□□□ 0.1
VRK3-225ENST00000601912 SH3BGRL2Q9UJC5 107 aa15.69■□□□□ 0.1
VRK3-225ENST00000601912 RP1L1Q8IWN7 2480 aaPredicted RBP15.68■□□□□ 0.1
VRK3-225ENST00000601912 A0A075B6Q4 140 aa15.68■□□□□ 0.1
VRK3-225ENST00000601912 A0A0U1RQV5 110 aa15.68■□□□□ 0.1
VRK3-225ENST00000601912 ZNF12P17014 697 aa15.68■□□□□ 0.1
VRK3-225ENST00000601912 CFL1P23528 166 aaKnown RBP15.68■□□□□ 0.1
VRK3-225ENST00000601912 SFRP5Q5T4F7 317 aa15.68■□□□□ 0.1
VRK3-225ENST00000601912 WBP1Q96G27 269 aa15.68■□□□□ 0.1
VRK3-225ENST00000601912 PIGMQ9H3S5 423 aa15.68■□□□□ 0.1
VRK3-225ENST00000601912 GPR84Q9NQS5 396 aa15.68■□□□□ 0.1
VRK3-225ENST00000601912 B3GNT2Q9NY97 397 aa15.68■□□□□ 0.1
VRK3-225ENST00000601912 TPRP12270 2363 aaKnown RBP15.68■□□□□ 0.1
VRK3-225ENST00000601912 SPENQ96T58 3664 aaKnown RBP15.67■□□□□ 0.1
VRK3-225ENST00000601912 ZNF503-AS2A6NEH8 195 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 NCR1O76036 304 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 LCATP04180 440 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 STOMP27105 288 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 APEX1P27695 318 aaKnown RBP15.67■□□□□ 0.1
VRK3-225ENST00000601912 S100A5P33763 92 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 CAV3P56539 151 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 GFOD2Q3B7J2 385 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 TMEM211Q6ICI0 200 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 DOK3Q7L591 496 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 CXorf67Q86X51 503 aaPredicted RBP15.67■□□□□ 0.1
VRK3-225ENST00000601912 C17orf78Q8N4C9 275 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 ZNF319Q9P2F9 582 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 ZNF629Q9UEG4 869 aaPredicted RBP15.67■□□□□ 0.1
VRK3-225ENST00000601912 PLEKHB1Q9UF11 243 aaPredicted RBP15.67■□□□□ 0.1
VRK3-225ENST00000601912 E9PLN8 166 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 MSTNO14793 375 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 APLNRP35414 380 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 BMXP51813 675 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 MOGQ16653 247 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 STAC2Q6ZMT1 411 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 MDP1Q86V88 176 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 CCDC54Q8NEL0 328 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 OR6Q1Q8NGQ2 317 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 ORAI1Q96D31 301 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 VKORC1Q9BQB6 163 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 NOX3Q9HBY0 568 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 ZNF275Q9NSD4 429 aaPredicted RBP15.67■□□□□ 0.1
VRK3-225ENST00000601912 PEX16Q9Y5Y5 336 aa15.67■□□□□ 0.1
VRK3-225ENST00000601912 TRGV8A0A0C4DH27 118 aa15.66■□□□□ 0.1
VRK3-225ENST00000601912 A0A0G2JNJ9 132 aa15.66■□□□□ 0.1
VRK3-225ENST00000601912 A0A1B0GTI1 187 aa15.66■□□□□ 0.1
VRK3-225ENST00000601912 NOTOA8MTQ0 251 aa15.66■□□□□ 0.1
VRK3-225ENST00000601912 CCL1P22362 96 aa15.66■□□□□ 0.1
VRK3-225ENST00000601912 CCNOP22674 350 aa15.66■□□□□ 0.1
VRK3-225ENST00000601912 PSMD7P51665 324 aa15.66■□□□□ 0.1
VRK3-225ENST00000601912 Q9UFV3 132 aa15.66■□□□□ 0.1
VRK3-225ENST00000601912 ZNF391Q9UJN7 358 aa15.66■□□□□ 0.1
VRK3-225ENST00000601912 FOXJ3Q9UPW0 622 aa15.66■□□□□ 0.1
VRK3-225ENST00000601912 AK6Q9Y3D8 172 aaKnown RBP15.66■□□□□ 0.1
VRK3-225ENST00000601912 RTTNQ86VV8 2226 aa15.65■□□□□ 0.1
VRK3-225ENST00000601912 LOC100509620A0A075B734 347 aa15.65■□□□□ 0.1
VRK3-225ENST00000601912 C5orf49A4QMS7 147 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms