RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	IGF2	P01344	180 aa		10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	IGLL1	P15814	213 aa		10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	SAA4	P35542	130 aa		10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	CD200	P41217	278 aa		10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	PRSS12	P56730	875 aa		10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	ECH1	Q13011	328 aa		10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	MALL	Q13021	153 aa		10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	KRT71	Q3SY84	523 aa		10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	METAP1D	Q6UB28	335 aa	Predicted RBP	10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	NDUFA11	Q86Y39	141 aa		10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	NKAIN4	Q8IVV8	208 aa		10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	OR51G2	Q8NGK0	314 aa		10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	RASSF5	Q8WWW0	418 aa		10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	LIPH	Q8WWY8	451 aa		10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	SPDL1	Q96EA4	605 aa		10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	MAEL	Q96JY0	434 aa	Known RBP	10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	NKX3-1	Q99801	234 aa	Predicted RBP	10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	SSX3	Q99909	188 aa		10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	SSU72	Q9NP77	194 aa	Known RBP	10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	HIF3A	Q9Y2N7	669 aa		10.06	□□□□□ -0.8
NUP62-223	ENST00000601665	MAB21L2	Q9Y586	359 aa		10.06	□□□□□ -0.8
NUP62-223	ENST00000601665		A6NLC8	198 aa		10.05	□□□□□ -0.8
NUP62-223	ENST00000601665		E9PQ18	207 aa		10.05	□□□□□ -0.8
NUP62-223	ENST00000601665	TSPAN19	P0C672	248 aa		10.05	□□□□□ -0.8
NUP62-223	ENST00000601665	CD28	P10747	220 aa		10.05	□□□□□ -0.8
NUP62-223	ENST00000601665	POU4F2	Q12837	409 aa		10.05	□□□□□ -0.8
NUP62-223	ENST00000601665	PAGE3	Q5JUK9	113 aa		10.05	□□□□□ -0.8
NUP62-223	ENST00000601665	SLC22A4	Q9H015	551 aa		10.05	□□□□□ -0.8
NUP62-223	ENST00000601665	C1orf123	Q9NWV4	160 aa		10.05	□□□□□ -0.8
NUP62-223	ENST00000601665	CCDC167	Q9P0B6	97 aa		10.05	□□□□□ -0.8
NUP62-223	ENST00000601665	GRHPR	Q9UBQ7	328 aa		10.05	□□□□□ -0.8
NUP62-223	ENST00000601665	ATPIF1	Q9UII2	106 aa		10.05	□□□□□ -0.8
NUP62-223	ENST00000601665	SH3GLB1	Q9Y371	365 aa		10.05	□□□□□ -0.8
NUP62-223	ENST00000601665	RER1	O15258	196 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	OR5F1	O95221	314 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	IFI30	P13284	250 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	CA6	P23280	308 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	RPL4	P36578	427 aa	Known RBP	10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	KLRD1	Q13241	179 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	CCDC92	Q53HC0	331 aa	Predicted RBP	10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	OTP	Q5XKR4	325 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	NCR3LG1	Q68D85	454 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	BLOC1S3	Q6QNY0	202 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	PGAP1	Q75T13	922 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	FAM90A1	Q86YD7	464 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	MICU2	Q8IYU8	434 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	PNKD	Q8N490	385 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	ANKRD42	Q8N9B4	389 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	BEND2	Q8NDZ0	799 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	OR51A7	Q8NH64	312 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	TAMM41	Q96BW9	452 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	BPIFA2	Q96DR5	249 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	ADAT1	Q9BUB4	502 aa	Known RBP	10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	POLR2J2	Q9GZM3	115 aa	Known RBP	10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	HDHD2	Q9H0R4	259 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	POLR2J3	Q9H1A7	115 aa	Known RBP	10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	RIMS3	Q9UJD0	308 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	GMEB1	Q9Y692	573 aa		10.04	□□□□□ -0.8
NUP62-223	ENST00000601665	IGHV3OR15-7	A0A075B7D8	119 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	TRAV27	A0A087WT01	109 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	TRBV5-3	A0A0A0MS03	114 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	TEX13C	A0A0J9YWL9	993 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665		A0A1B0GWJ7	208 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	POLR3G	O15318	223 aa	Predicted RBP	10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	PPP1R3D	O95685	299 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	GRP	P07492	148 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	PF4V1	P10720	104 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	FAH	P16930	419 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	IFNA8	P32881	189 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	MSX2	P35548	267 aa	Predicted RBP	10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	CENPA	P49450	140 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	UBE2E1	P51965	193 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	LSM6	P62312	80 aa	Known RBP	10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	ACSM1	Q08AH1	577 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	PIN1	Q13526	163 aa	Predicted RBP	10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	GK2	Q14410	553 aa	Predicted RBP	10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	MICB	Q29980	383 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	LRRC75B	Q2VPJ9	315 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	KLHL22	Q53GT1	634 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	SLC36A1	Q7Z2H8	476 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	MRPL21	Q7Z2W9	205 aa	Known RBP	10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	OAF	Q86UD1	273 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	GLB1L2	Q8IW92	636 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	PLPP7	Q8NBV4	271 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	GJC3	Q8NFK1	279 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	SLC7A13	Q8TCU3	470 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	LRRC8C	Q8TDW0	803 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	SLCO4A1	Q96BD0	722 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	COQ7	Q99807	217 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	CITED2	Q99967	270 aa	Predicted RBP	10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	B9D2	Q9BPU9	175 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	NDEL1	Q9GZM8	345 aa		10.03	□□□□□ -0.8
NUP62-223	ENST00000601665	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	10.02	□□□□□ -0.81
NUP62-223	ENST00000601665	WI2-2373I1.2	A0A1W2PRP0	233 aa		10.02	□□□□□ -0.81
NUP62-223	ENST00000601665	HTR3E	A5X5Y0	456 aa		10.02	□□□□□ -0.81
NUP62-223	ENST00000601665	NDUFB3	O43676	98 aa		10.02	□□□□□ -0.81
NUP62-223	ENST00000601665	AHCYL1	O43865	530 aa		10.02	□□□□□ -0.81
NUP62-223	ENST00000601665	GMDS	O60547	372 aa		10.02	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms