RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 BEND6Q5SZJ8 279 aaPredicted RBP13.83□□□□□ -0.2
USE1-208ENST00000600970 HIST2H3PS2Q5TEC6 136 aa13.83□□□□□ -0.2
USE1-208ENST00000600970 SAMD5Q5TGI4 173 aa13.83□□□□□ -0.2
USE1-208ENST00000600970 DHRS7BQ6IAN0 325 aaPredicted RBP13.83□□□□□ -0.2
USE1-208ENST00000600970 HIST2H3AQ71DI3 136 aa13.83□□□□□ -0.2
USE1-208ENST00000600970 BOLLQ8N9W6 283 aaKnown RBP13.83□□□□□ -0.2
USE1-208ENST00000600970 TPD52L3Q96J77 140 aa13.83□□□□□ -0.2
USE1-208ENST00000600970 HDHD2Q9H0R4 259 aa13.83□□□□□ -0.2
USE1-208ENST00000600970 J3KTA2 159 aa13.82□□□□□ -0.2
USE1-208ENST00000600970 KDELR2P33947 212 aa13.82□□□□□ -0.2
USE1-208ENST00000600970 EGR3Q06889 387 aa13.82□□□□□ -0.2
USE1-208ENST00000600970 CYLC2Q14093 348 aaPredicted RBP13.82□□□□□ -0.2
USE1-208ENST00000600970 GK2Q14410 553 aaPredicted RBP13.82□□□□□ -0.2
USE1-208ENST00000600970 TRAM2Q15035 370 aa13.82□□□□□ -0.2
USE1-208ENST00000600970 ZBED5Q49AG3 693 aa13.82□□□□□ -0.2
USE1-208ENST00000600970 ERICH5Q6P6B1 374 aa13.82□□□□□ -0.2
USE1-208ENST00000600970 BTN2A1Q7KYR7 527 aa13.82□□□□□ -0.2
USE1-208ENST00000600970 RNF113BQ8IZP6 322 aaKnown RBP13.82□□□□□ -0.2
USE1-208ENST00000600970 OFCC1Q8IZS5 231 aa13.82□□□□□ -0.2
USE1-208ENST00000600970 GJC3Q8NFK1 279 aa13.82□□□□□ -0.2
USE1-208ENST00000600970 ZNF583Q96ND8 569 aa13.82□□□□□ -0.2
USE1-208ENST00000600970 SH3GL1Q99961 368 aa13.82□□□□□ -0.2
USE1-208ENST00000600970 FNDC11Q9BVV2 318 aa13.82□□□□□ -0.2
USE1-208ENST00000600970 NMNAT1Q9HAN9 279 aaPredicted RBP13.82□□□□□ -0.2
USE1-208ENST00000600970 VSX1Q9NZR4 365 aaPredicted RBP13.82□□□□□ -0.2
USE1-208ENST00000600970 RPS6KA6Q9UK32 745 aa13.82□□□□□ -0.2
USE1-208ENST00000600970 POLR1DQ9Y2S0 133 aa13.82□□□□□ -0.2
USE1-208ENST00000600970 SNX13Q9Y5W8 968 aa13.82□□□□□ -0.2
USE1-208ENST00000600970 LHFPL6Q9Y693 200 aa13.82□□□□□ -0.2
USE1-208ENST00000600970 KMT2CQ8NEZ4 4911 aaKnown RBP13.82□□□□□ -0.2
USE1-208ENST00000600970 PLXNB1O43157 2135 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 A0A087WUU8 490 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 GYPAP02724 150 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 OPN1MWP04001 364 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 OPN1MW2P0DN77 364 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 OPN1MW3P0DN78 364 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 SDHAP31040 664 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 SELENOWP63302 87 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 OR8B8Q15620 311 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 FAM189A2Q15884 450 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 MEP1BQ16820 701 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 KRTAP27-1Q3LI81 207 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 CORO6Q6QEF8 472 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 TBPL2Q6SJ96 375 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 TMPRSS11FQ6ZWK6 438 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 OR8J3Q8NGG0 315 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 STON2Q8WXE9 905 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 ACOT11Q8WXI4 607 aaPredicted RBP13.81□□□□□ -0.2
USE1-208ENST00000600970 NUAK2Q9H093 628 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 SEMA6AQ9H2E6 1030 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 FN3KRPQ9HA64 309 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 ZNRD1Q9P1U0 126 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 VPREB3Q9UKI3 123 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 FAM96BQ9Y3D0 163 aa13.81□□□□□ -0.2
USE1-208ENST00000600970 TRAV38-1A0A0B4J264 116 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 OOEPA6NGQ2 149 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 FXYD1O00168 92 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 DVL1O14640 695 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 FFAR1O14842 300 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 NDUFA2O43678 99 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 OR10H3O60404 316 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 ACSM4P0C7M7 580 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 OR8G1Q15617 311 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 ZNF730Q6ZMV8 503 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 PTCHD4Q6ZW05 846 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 MBOAT2Q6ZWT7 520 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 REC114Q7Z4M0 266 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 VMO1Q7Z5L0 202 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.8□□□□□ -0.2
USE1-208ENST00000600970 NAA40Q86UY6 237 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 SLCO4A1Q96BD0 722 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 CNTD2Q9H8S5 307 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 NRIP3Q9NQ35 241 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 TRIM36Q9NQ86 728 aa13.8□□□□□ -0.2
USE1-208ENST00000600970 BTBD17A6NE02 478 aa13.79□□□□□ -0.2
USE1-208ENST00000600970 SOCS2O14508 198 aa13.79□□□□□ -0.2
USE1-208ENST00000600970 PTBP3O95758 552 aaKnown RBP13.79□□□□□ -0.2
USE1-208ENST00000600970 ECDO95905 644 aaPredicted RBP13.79□□□□□ -0.2
USE1-208ENST00000600970 FBP1P09467 338 aa13.79□□□□□ -0.2
USE1-208ENST00000600970 CA6P23280 308 aa13.79□□□□□ -0.2
USE1-208ENST00000600970 TGFBR2P37173 567 aa13.79□□□□□ -0.2
USE1-208ENST00000600970 CDONQ4KMG0 1287 aa13.79□□□□□ -0.2
USE1-208ENST00000600970 SLC35E4Q6ICL7 350 aa13.79□□□□□ -0.2
USE1-208ENST00000600970 PGM2L1Q6PCE3 622 aa13.79□□□□□ -0.2
USE1-208ENST00000600970 PGAP1Q75T13 922 aa13.79□□□□□ -0.2
USE1-208ENST00000600970 SPRYD4Q8WW59 207 aaPredicted RBP13.79□□□□□ -0.2
USE1-208ENST00000600970 TSSK2Q96PF2 358 aa13.79□□□□□ -0.2
USE1-208ENST00000600970 CAB39Q9Y376 341 aaPredicted RBP13.79□□□□□ -0.2
USE1-208ENST00000600970 KPTNQ9Y664 436 aa13.79□□□□□ -0.2
USE1-208ENST00000600970 A0A1B0GVI7 797 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 F5H5K5 113 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 DCTN6O00399 190 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 PTP4A3O75365 173 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 NDUFB2O95178 105 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 IFNW1P05000 195 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 CDKN2AP42771 156 aaKnown RBP13.78□□□□□ -0.2
USE1-208ENST00000600970 CENPAP49450 140 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 POU4F2Q12837 409 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 MALLQ13021 153 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 HERPUD1Q15011 391 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms