RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	POM121L2	Q96KW2	1035 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	SP140L	Q9H930	580 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	ACOT13	Q9NPJ3	140 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	ACOXL	Q9NUZ1	547 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	CREBBP	Q92793	2442 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	HRNR	Q86YZ3	2850 aa	Predicted RBP	18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	LOC100509620	A0A075B734	347 aa		18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	IGHV2OR16-5	A0A0B4J2B6	119 aa		18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	C5orf49	A4QMS7	147 aa		18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	ATP6V1B1	P15313	513 aa		18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	SLC6A9	P48067	706 aa		18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	CX3CR1	P49238	355 aa		18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	SPHAR	Q15513	63 aa		18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	MED22	Q15528	200 aa		18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	ARL9	Q6T311	187 aa		18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	DRAM2	Q6UX65	266 aa		18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	LILRB1	Q8NHL6	650 aa	Predicted RBP	18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	SLC7A6	Q92536	515 aa		18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	AKAP1	Q92667	903 aa	Known RBP eCLIP	18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	PELI1	Q96FA3	418 aa		18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	MRPS26	Q9BYN8	205 aa	Known RBP	18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	PLEKHF2	Q9H8W4	249 aa		18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	TRIM36	Q9NQ86	728 aa		18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	BABAM2	Q9NXR7	383 aa		18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	RTTN	Q86VV8	2226 aa		18.97	■□□□□ 0.63
LTBP4-227	ENST00000600026	DBH	P09172	617 aa		18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026	CCL2	P13500	99 aa		18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026	OTX1	P32242	354 aa	Predicted RBP	18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026	TAS2R43	P59537	309 aa		18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026	PSMA6	P60900	246 aa	Known RBP	18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026	KRTAP27-1	Q3LI81	207 aa		18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026	ZNF672	Q499Z4	452 aa	Predicted RBP	18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026	KCTD8	Q6ZWB6	473 aa		18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026	ZNF367	Q7RTV3	350 aa		18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026	KLB	Q86Z14	1044 aa		18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026	DOK1	Q99704	481 aa		18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026	EIF3K	Q9UBQ5	218 aa	Known RBP	18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026	POU2F3	Q9UKI9	436 aa		18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026	LSM2	Q9Y333	95 aa	Known RBP	18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026	GRIP1	Q9Y3R0	1128 aa		18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026	ATP23	Q9Y6H3	246 aa		18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026		R4GMQ9	66 aa		18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026	DCHS2	Q6V1P9	2916 aa		18.96	■□□□□ 0.63
LTBP4-227	ENST00000600026	CACNA1D	Q01668	2161 aa		18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	TMEM269	A0A1B0GVZ9	245 aa		18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	ACOD1	A6NK06	481 aa		18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	LOC110117498-PIK3R3	F6TDL0	507 aa		18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	ANXA2	P07355	339 aa	Known RBP	18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	ACSM4	P0C7M7	580 aa		18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	ZNF35	P13682	527 aa		18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	PCMT1	P22061	227 aa		18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	PSMB10	P40306	273 aa		18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	RGS6	P49758	472 aa		18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	RSPO1	Q2MKA7	263 aa	Predicted RBP	18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	PAQR4	Q8N4S7	273 aa	Predicted RBP	18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	ZNF485	Q8NCK3	441 aa		18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	RORB	Q92753	470 aa		18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	OR5M11	Q96RB7	305 aa		18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	MOB1A	Q9H8S9	216 aa		18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	UBTD1	Q9HAC8	227 aa		18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	GTF2A1L	Q9UNN4	478 aa		18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	CELSR2	Q9HCU4	2923 aa		18.95	■□□□□ 0.62
LTBP4-227	ENST00000600026	FBN2	P35556	2912 aa		18.94	■□□□□ 0.62
LTBP4-227	ENST00000600026	TRIM64C	A6NLI5	447 aa		18.94	■□□□□ 0.62
LTBP4-227	ENST00000600026		E7EQL1	145 aa		18.94	■□□□□ 0.62
LTBP4-227	ENST00000600026	LCK	P06239	509 aa		18.94	■□□□□ 0.62
LTBP4-227	ENST00000600026	MMP16	P51512	607 aa		18.94	■□□□□ 0.62
LTBP4-227	ENST00000600026	ZNF121	P58317	390 aa	Predicted RBP	18.94	■□□□□ 0.62
LTBP4-227	ENST00000600026	BDH1	Q02338	343 aa		18.94	■□□□□ 0.62
LTBP4-227	ENST00000600026	HGFAC	Q04756	655 aa		18.94	■□□□□ 0.62
LTBP4-227	ENST00000600026	CCDC58	Q4VC31	144 aa		18.94	■□□□□ 0.62
LTBP4-227	ENST00000600026	UBE2U	Q5VVX9	321 aa		18.94	■□□□□ 0.62
LTBP4-227	ENST00000600026	UNQ6126/PRO20091	Q6UXV3	157 aa		18.94	■□□□□ 0.62
LTBP4-227	ENST00000600026	C4orf45	Q96LM5	186 aa		18.94	■□□□□ 0.62
LTBP4-227	ENST00000600026	ISYNA1	Q9NPH2	558 aa		18.94	■□□□□ 0.62
LTBP4-227	ENST00000600026	BRD7	Q9NPI1	651 aa		18.94	■□□□□ 0.62
LTBP4-227	ENST00000600026	HS3ST1	O14792	307 aa		18.93	■□□□□ 0.62
LTBP4-227	ENST00000600026	LCAT	P04180	440 aa		18.93	■□□□□ 0.62
LTBP4-227	ENST00000600026	HSMCR30	P0CW71	290 aa		18.93	■□□□□ 0.62
LTBP4-227	ENST00000600026	SMIM18	P0DKX4	95 aa		18.93	■□□□□ 0.62
LTBP4-227	ENST00000600026	TGM4	P49221	684 aa		18.93	■□□□□ 0.62
LTBP4-227	ENST00000600026	ACSM1	Q08AH1	577 aa		18.93	■□□□□ 0.62
LTBP4-227	ENST00000600026	NEDD8	Q15843	81 aa		18.93	■□□□□ 0.62
LTBP4-227	ENST00000600026	FDX2	Q6P4F2	183 aa		18.93	■□□□□ 0.62
LTBP4-227	ENST00000600026	RPL22L1	Q6P5R6	122 aa	Known RBP	18.93	■□□□□ 0.62
LTBP4-227	ENST00000600026	NRGN	Q92686	78 aa		18.93	■□□□□ 0.62
LTBP4-227	ENST00000600026	PGAM5	Q96HS1	289 aa		18.93	■□□□□ 0.62
LTBP4-227	ENST00000600026	CISD1	Q9NZ45	108 aa	Known RBP	18.93	■□□□□ 0.62
LTBP4-227	ENST00000600026	SCOC	Q9UIL1	159 aa		18.93	■□□□□ 0.62
LTBP4-227	ENST00000600026	OR52A1	Q9UKL2	312 aa		18.93	■□□□□ 0.62
LTBP4-227	ENST00000600026	N6AMT1	Q9Y5N5	214 aa		18.93	■□□□□ 0.62
LTBP4-227	ENST00000600026	SRSF10	O75494	262 aa	Known RBP	18.92	■□□□□ 0.62
LTBP4-227	ENST00000600026	CLPTM1	O96005	669 aa		18.92	■□□□□ 0.62
LTBP4-227	ENST00000600026	ALKBH1	Q13686	389 aa	Known RBP	18.92	■□□□□ 0.62
LTBP4-227	ENST00000600026	BCL2L15	Q5TBC7	163 aa		18.92	■□□□□ 0.62
LTBP4-227	ENST00000600026	FAM57B	Q71RH2	274 aa		18.92	■□□□□ 0.62
LTBP4-227	ENST00000600026	CATSPERD	Q86XM0	798 aa		18.92	■□□□□ 0.62
LTBP4-227	ENST00000600026	NUP37	Q8NFH4	326 aa		18.92	■□□□□ 0.62
LTBP4-227	ENST00000600026	FBXW5	Q969U6	566 aa		18.92	■□□□□ 0.62
LTBP4-227	ENST00000600026	APOBEC3D	Q96AK3	386 aa	Predicted RBP	18.92	■□□□□ 0.62

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms