RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	SEMA6A	Q9H2E6	1030 aa		12.29	□□□□□ -0.44
IRF3-223	ENST00000599223	RERGL	Q9H628	205 aa		12.29	□□□□□ -0.44
IRF3-223	ENST00000599223	NMNAT1	Q9HAN9	279 aa	Predicted RBP	12.29	□□□□□ -0.44
IRF3-223	ENST00000599223	DNAJB9	Q9UBS3	223 aa		12.29	□□□□□ -0.44
IRF3-223	ENST00000599223	OR5V1	Q9UGF6	321 aa		12.29	□□□□□ -0.44
IRF3-223	ENST00000599223	SIGLEC7	Q9Y286	467 aa		12.29	□□□□□ -0.44
IRF3-223	ENST00000599223	COA3	Q9Y2R0	106 aa	Predicted RBP	12.29	□□□□□ -0.44
IRF3-223	ENST00000599223	TRAV40	A0A0B4J280	105 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	DCTN6	O00399	190 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	CST1	P01037	141 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	FABP3	P05413	133 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	RNASE1	P07998	156 aa	Known RBP	12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	WNT2	P09544	360 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	RAC2	P15153	192 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	SDHA	P31040	664 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	IFNA8	P32881	189 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	HOXA4	Q00056	320 aa	Predicted RBP	12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	FOXL1	Q12952	345 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	BAMBI	Q13145	260 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	SEC23B	Q15437	767 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	SLC9A3R2	Q15599	337 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	LPCAT4	Q643R3	524 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	SHISA2	Q6UWI4	295 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	FBXW12	Q6X9E4	464 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	ZBTB49	Q6ZSB9	765 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	AMIGO2	Q86SJ2	522 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	ZDHHC21	Q8IVQ6	265 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	GLB1L2	Q8IW92	636 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	RNF113B	Q8IZP6	322 aa	Known RBP	12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	PARP8	Q8N3A8	854 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	PACRGL	Q8N7B6	248 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	BHLHE23	Q8NDY6	225 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	TSSK2	Q96PF2	358 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	GPX7	Q96SL4	187 aa	Predicted RBP	12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	WAC	Q9BTA9	647 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	MRI1	Q9BV20	369 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	SSBP3	Q9BWW4	388 aa	Predicted RBP	12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	NUAK2	Q9H093	628 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	WDR76	Q9H967	626 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	UNKL	Q9H9P5	680 aa	Known RBP	12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	NRIP3	Q9NQ35	241 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	VSX1	Q9NZR4	365 aa	Predicted RBP	12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	LRCH1	Q9Y2L9	728 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	LHFPL6	Q9Y693	200 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	ENPP4	Q9Y6X5	453 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223	TG	P01266	2768 aa		12.28	□□□□□ -0.44
IRF3-223	ENST00000599223		F5H5P2	479 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	AHCYL1	O43865	530 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	PTP4A3	O75365	173 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	E2F6	O75461	281 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	KHDRBS3	O75525	346 aa	Known RBP	12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	RPS2	P15880	293 aa	Known RBP	12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	TUBG1	P23258	451 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	PMEL	P40967	661 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	OMP	P47874	163 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	LSM6	P62312	80 aa	Known RBP	12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	CORO6	Q6QEF8	472 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	MOGAT3	Q86VF5	341 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	KLB	Q86Z14	1044 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	MUC20	Q8N307	709 aa	Predicted RBP	12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	FAM86B1	Q8N7N1	296 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	ATG16L2	Q8NAA4	619 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	UPRT	Q96BW1	309 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	GPA33	Q99795	319 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	ZNF696	Q9H7X3	374 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	ZMAT3	Q9HA38	289 aa	Known RBP	12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	TMEM165	Q9HC07	324 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	IL1RAP	Q9NPH3	570 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	TUBG2	Q9NRH3	451 aa		12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	FAM32A	Q9Y421	112 aa	Known RBP	12.27	□□□□□ -0.45
IRF3-223	ENST00000599223	IGHV2-70D	A0A0C4DH43	119 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	TRBV4-1	A0A0J9YWV2	114 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223		H0YJX3	145 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	CLDN34	H7C241	214 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	SURF4	O15260	269 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	NDUFB2	O95178	105 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	PLAT	P00750	562 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	ANOS1	P23352	680 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	CDKN2A	P42771	156 aa	Known RBP	12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	HIST1H3A	P68431	136 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	RSPO1	Q2MKA7	263 aa	Predicted RBP	12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	FGD3	Q5JSP0	725 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	HIST2H3PS2	Q5TEC6	136 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	LEG1	Q6P5S2	330 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	CFAP77	Q6ZQR2	320 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	C9orf139	Q6ZV77	190 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	HIST2H3A	Q71DI3	136 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	CYP4Z1	Q86W10	505 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	ZDHHC13	Q8IUH4	622 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	OR8G5	Q8NG78	346 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	PTP4A1	Q93096	173 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	SLC30A2	Q9BRI3	323 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	TMEM246	Q9BRR3	403 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	ANKRD19P	Q9H560	264 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	NDUFAF4	Q9P032	175 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	ATPIF1	Q9UII2	106 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	TMEM5	Q9Y2B1	443 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	POLR1D	Q9Y2S0	133 aa		12.26	□□□□□ -0.45
IRF3-223	ENST00000599223	LRRC42	Q9Y546	428 aa		12.26	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms