RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 IGHV2OR16-5A0A0B4J2B6 119 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 HS3ST1O14792 307 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 ZNF254O75437 659 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 CLPTM1O96005 669 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 SERPINA5P05154 406 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 LCKP06239 509 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 TACSTD2P09758 323 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 H2BFMP0C1H6 154 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 APEX1P27695 318 aaKnown RBP12.95□□□□□ -0.34
TRIM28-207ENST00000597136 ECH1Q13011 328 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 SPHARQ15513 63 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 RSPO1Q2MKA7 263 aaPredicted RBP12.95□□□□□ -0.34
TRIM28-207ENST00000597136 UBE2UQ5VVX9 321 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 ALDH16A1Q8IZ83 802 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 PAQR4Q8N4S7 273 aaPredicted RBP12.95□□□□□ -0.34
TRIM28-207ENST00000597136 YIPF7Q8N8F6 280 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 OR1F12Q8NHA8 337 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 PELI1Q96FA3 418 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 ACOXLQ9NUZ1 547 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 CISD1Q9NZ45 108 aaKnown RBP12.95□□□□□ -0.34
TRIM28-207ENST00000597136 SCOCQ9UIL1 159 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 ATP23Q9Y6H3 246 aa12.95□□□□□ -0.34
TRIM28-207ENST00000597136 CRYAAP02489 173 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 ZNF35P13682 527 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 PAX7P23759 505 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 RIDAP52758 137 aaKnown RBP12.94□□□□□ -0.34
TRIM28-207ENST00000597136 PLP2Q04941 152 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 MED22Q15528 200 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 TAF13Q15543 124 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 NEDD8Q15843 81 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 LIPNQ5VXI9 398 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 FAM220AQ7Z4H9 259 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.94□□□□□ -0.34
TRIM28-207ENST00000597136 FCGR1BQ92637 280 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 RNF166Q96A37 237 aaPredicted RBP12.94□□□□□ -0.34
TRIM28-207ENST00000597136 COQ7Q99807 217 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 VCX3AQ9NNX9 186 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 BABAM2Q9NXR7 383 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 ATPIF1Q9UII2 106 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 ST6GALNAC2Q9UJ37 374 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 FBXL3Q9UKT7 428 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 LOC100509620A0A075B734 347 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 RPP14O95059 124 aaKnown RBP12.94□□□□□ -0.34
TRIM28-207ENST00000597136 COX5BP10606 129 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 JUNBP17275 347 aaPredicted RBP12.94□□□□□ -0.34
TRIM28-207ENST00000597136 HTR5AP47898 357 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 GRB2P62993 217 aaKnown RBP12.94□□□□□ -0.34
TRIM28-207ENST00000597136 GALK2Q01415 458 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 KRTAP27-1Q3LI81 207 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 ZNF367Q7RTV3 350 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 KLBQ86Z14 1044 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 SLC7A6Q92536 515 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 COG8Q96MW5 612 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 POU2F3Q9UKI9 436 aa12.94□□□□□ -0.34
TRIM28-207ENST00000597136 MED13LQ71F56 2210 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 IQCMA0A1B0GVH7 501 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 E9PI62 339 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 INMTO95050 263 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 LALBAP00709 142 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 TFAP2AP05549 437 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 SOD3P08294 240 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 DBHP09172 617 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 CD53P19397 219 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 OTX1P32242 354 aaPredicted RBP12.93□□□□□ -0.34
TRIM28-207ENST00000597136 DCTDP32321 178 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 PSMB10P40306 273 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 GBX2P52951 348 aaPredicted RBP12.93□□□□□ -0.34
TRIM28-207ENST00000597136 ACSM1Q08AH1 577 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 PAMR1Q6UXH9 720 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 CDH24Q86UP0 819 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 ZNF611Q8N823 705 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 SLC30A7Q8NEW0 376 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 RORBQ92753 470 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 FBXW5Q969U6 566 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 MUL1Q969V5 352 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 MGLLQ99685 303 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 KCNJ15Q99712 375 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 NIPAL2Q9H841 368 aa12.93□□□□□ -0.34
TRIM28-207ENST00000597136 MOV10Q9HCE1 1003 aaKnown RBP12.93□□□□□ -0.34
TRIM28-207ENST00000597136 YLPM1P49750 1951 aaKnown RBP12.92□□□□□ -0.34
TRIM28-207ENST00000597136 F5H5K5 113 aa12.92□□□□□ -0.34
TRIM28-207ENST00000597136 SRSF10O75494 262 aaKnown RBP12.92□□□□□ -0.34
TRIM28-207ENST00000597136 ATE1O95260 518 aa12.92□□□□□ -0.34
TRIM28-207ENST00000597136 CD8AP01732 235 aa12.92□□□□□ -0.34
TRIM28-207ENST00000597136 DANCRP0C864 163 aa12.92□□□□□ -0.34
TRIM28-207ENST00000597136 HSMCR30P0CW71 290 aa12.92□□□□□ -0.34
TRIM28-207ENST00000597136 STOMP27105 288 aa12.92□□□□□ -0.34
TRIM28-207ENST00000597136 HSD11B1P28845 292 aa12.92□□□□□ -0.34
TRIM28-207ENST00000597136 PRKXP51817 358 aa12.92□□□□□ -0.34
TRIM28-207ENST00000597136 GTF2A1P52655 376 aaPredicted RBP12.92□□□□□ -0.34
TRIM28-207ENST00000597136 VHLLQ6RSH7 139 aa12.92□□□□□ -0.34
TRIM28-207ENST00000597136 SPTSSAQ969W0 71 aa12.92□□□□□ -0.34
TRIM28-207ENST00000597136 POM121L2Q96KW2 1035 aa12.92□□□□□ -0.34
TRIM28-207ENST00000597136 KCNS3Q9BQ31 491 aa12.92□□□□□ -0.34
TRIM28-207ENST00000597136 OR51B6Q9H340 312 aa12.92□□□□□ -0.34
TRIM28-207ENST00000597136 ISYNA1Q9NPH2 558 aa12.92□□□□□ -0.34
TRIM28-207ENST00000597136 TRIM36Q9NQ86 728 aa12.92□□□□□ -0.34
TRIM28-207ENST00000597136 GRIP1Q9Y3R0 1128 aa12.92□□□□□ -0.34
TRIM28-207ENST00000597136 ACANP16112 2415 aa12.92□□□□□ -0.34
TRIM28-207ENST00000597136 TMEM269A0A1B0GVZ9 245 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms