RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ISPDA4D126 451 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 PRSS37A4D1T9 235 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 A6NIZ1 184 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 LIPT2A6NK58 231 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 LOC110117498-PIK3R3F6TDL0 507 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 J3QLW9 94 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 DCTN6O00399 190 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 PHYHO14832 338 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 EFNA2O43921 213 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 UPK1BO75841 260 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 SYNGR4O95473 234 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 CLEC2LP0C7M8 214 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 IMPDH2P12268 514 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 ZNF19P17023 458 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 PYCR1P32322 319 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 EIF1P41567 113 aaKnown RBP11.13□□□□□ -0.63
SCAF1-202ENST00000595242 GBX2P52951 348 aaPredicted RBP11.13□□□□□ -0.63
SCAF1-202ENST00000595242 RAP1BP61224 184 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 RAP1AP62834 184 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 IFITM3Q01628 133 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 PUDPQ08623 228 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 SELENBP1Q13228 472 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 PPA1Q15181 289 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 ZNF181Q2M3W8 571 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 RGS21Q2M5E4 152 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 C3orf33Q6P1S2 294 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 TFAP2EQ6VUC0 442 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 PLEKHG7Q6ZR37 379 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 H1FNTQ75WM6 255 aaPredicted RBP11.13□□□□□ -0.63
SCAF1-202ENST00000595242 OR6V1Q8N148 313 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 PIAS4Q8N2W9 510 aaPredicted RBP11.13□□□□□ -0.63
SCAF1-202ENST00000595242 PARP16Q8N5Y8 322 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 OR51L1Q8NGJ5 315 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 OR6K6Q8NGW6 343 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 AP3S1Q92572 193 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 ZBTB8AQ96BR9 441 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 SLC25A36Q96CQ1 311 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 ARL5BQ96KC2 179 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 PIMREGQ9BSJ6 248 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 SOX7Q9BT81 388 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 SERINC1Q9NRX5 453 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 TBCCD1Q9NVR7 557 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 PAQR5Q9NXK6 330 aaPredicted RBP11.13□□□□□ -0.63
SCAF1-202ENST00000595242 METRNQ9UJH8 293 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 ZNF281Q9Y2X9 895 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 IGHV4-61A0A0C4DH41 118 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 A0A1W2PRG6 482 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 SHISA3A0PJX4 238 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 ANKRD61A6NGH8 418 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 SHISA8B8ZZ34 492 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 FAM157AC9JC47 383 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 C11orf98E9PRG8 122 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 MS4A18H0YCH9 400 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 NDUFS8O00217 210 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 CTDSP2O14595 271 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 XKRYO14609 159 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 CXCL13O43927 109 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 OR6A2O95222 327 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 ABHD16AO95870 558 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 SERPINA3P01011 423 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 TNFSF8P32971 234 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 PDLIM4P50479 330 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 DAP3P51398 398 aaKnown RBP11.12□□□□□ -0.63
SCAF1-202ENST00000595242 HNRNPA0Q13151 305 aaKnown RBP11.12□□□□□ -0.63
SCAF1-202ENST00000595242 OXA1LQ15070 435 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 STK11Q15831 433 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 MS4A18Q3C1V0 323 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 GLYR1Q49A26 553 aaPredicted RBP11.12□□□□□ -0.63
SCAF1-202ENST00000595242 TP53I3Q53FA7 332 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 HIST2H2BDQ6DRA6 164 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 ARL9Q6T311 187 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 NHLRC1Q6VVB1 395 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 DCDC5Q6ZRR9 648 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 BHLHA15Q7RTS1 189 aaPredicted RBP11.12□□□□□ -0.63
SCAF1-202ENST00000595242 TPRA1Q86W33 373 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 GTPBP8Q8N3Z3 284 aaPredicted RBP11.12□□□□□ -0.63
SCAF1-202ENST00000595242 ASB10Q8WXI3 467 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 PHYHIPQ92561 330 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 RNF166Q96A37 237 aaPredicted RBP11.12□□□□□ -0.63
SCAF1-202ENST00000595242 KLHL15Q96M94 604 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 TSSK2Q96PF2 358 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 CCDC32Q9BV29 185 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 SYT4Q9H2B2 425 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 WDR76Q9H967 626 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 KLHL13Q9P2N7 655 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 POU2F3Q9UKI9 436 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 VDAC3Q9Y277 283 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 CMAHPQ9Y471 501 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 TMEM14AQ9Y6G1 99 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 V9GYH0 126 aa11.12□□□□□ -0.63
SCAF1-202ENST00000595242 ARPC4-TTLL3A0A0A6YYG9 625 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 SLC22A23A1A5C7 686 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 PRR32B1ATL7 298 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 GATBO75879 557 aaKnown RBP11.11□□□□□ -0.63
SCAF1-202ENST00000595242 OPN1LWP04000 364 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 GTF2E2P29084 291 aaKnown RBP11.11□□□□□ -0.63
SCAF1-202ENST00000595242 GDI2P50395 445 aaKnown RBP11.11□□□□□ -0.63
SCAF1-202ENST00000595242 FABP6P51161 128 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 HCCSP53701 268 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 EGR3Q06889 387 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms