RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 TLX2O43763 284 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-227ENST00000591849 CD5LO43866 347 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 NCR1O76036 304 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 ANXA2P07355 339 aaKnown RBP8.58□□□□□ -1.04
BRCA1-227ENST00000591849 TNFRSF1AP19438 455 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 KITLGP21583 273 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 GIFP27352 417 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 NAA10P41227 235 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-227ENST00000591849 CRYBB2P43320 205 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 MMP15P51511 669 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 RAD23AP54725 363 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 LINC01590Q5TEZ4 76 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 DRAM2Q6UX65 266 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 FBXW12Q6X9E4 464 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 PGAP1Q75T13 922 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 NAA40Q86UY6 237 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 ZNF454Q8N9F8 522 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 OR8G5Q8NG78 346 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 OR13G1Q8NGZ3 307 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 RAB1CQ92928 201 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 STMN2Q93045 179 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 YIPF5Q969M3 257 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 KCNJ15Q99712 375 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 PKP2Q99959 881 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 RBM4BQ9BQ04 359 aaKnown RBP8.58□□□□□ -1.04
BRCA1-227ENST00000591849 OSBPL10Q9BXB5 764 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 GABARAPL1Q9H0R8 117 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 ZNF275Q9NSD4 429 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-227ENST00000591849 TMEM100Q9NV29 134 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 TREM2Q9NZC2 230 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 LAMP5Q9UJQ1 280 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 ARFGEF3Q5TH69 2177 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 ZANQ9Y493 2812 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 ISPDA4D126 451 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 A8MV72 311 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-227ENST00000591849 CLDN25C9JDP6 229 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 INAFM1C9JVW0 142 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 SELENOFO60613 162 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 BAG2O95816 211 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 LYNP07948 512 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 SLC2A1P11166 492 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 CX3CR1P49238 355 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 MVKQ03426 396 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 CDK5R2Q13319 367 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 RIN1Q13671 783 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 PCK2Q16822 640 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 RSPO1Q2MKA7 263 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-227ENST00000591849 SLX4IPQ5VYV7 408 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 KDM4DQ6B0I6 523 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 KRT77Q7Z794 578 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 TCEANCQ8N8B7 351 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 BHLHE23Q8NDY6 225 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 BBS1Q8NFJ9 593 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 OR10S1Q8NGN2 331 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 ABHD6Q9BV23 337 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 TOR3AQ9H497 397 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 BRD7Q9NPI1 651 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 PNRC2Q9NPJ4 139 aaKnown RBP8.57□□□□□ -1.04
BRCA1-227ENST00000591849 DDX28Q9NUL7 540 aaKnown RBP8.57□□□□□ -1.04
BRCA1-227ENST00000591849 DNAJC27Q9NZQ0 273 aa8.57□□□□□ -1.04
BRCA1-227ENST00000591849 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-227ENST00000591849 A0A096LNT2 108 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 TGFAP01135 160 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 MRPL3P09001 348 aaKnown RBP8.56□□□□□ -1.04
BRCA1-227ENST00000591849 TACSTD2P09758 323 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 IGHV4-31P0DP07 118 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 SRP9P49458 86 aaKnown RBP8.56□□□□□ -1.04
BRCA1-227ENST00000591849 CDH15P55291 814 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 GK2Q14410 553 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-227ENST00000591849 TRIP10Q15642 601 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 TIGD6Q17RP2 521 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 GFOD2Q3B7J2 385 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 KRTAP27-1Q3LI81 207 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 AVPI1Q5T686 147 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 FAM166AQ6J272 317 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 COLCA1Q6ZS62 124 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 FAM57BQ71RH2 274 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 MEPCEQ7L2J0 689 aaKnown RBP8.56□□□□□ -1.04
BRCA1-227ENST00000591849 SLC16A9Q7RTY1 509 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 TIGD4Q8IY51 512 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 OTOSQ8NHW6 89 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 RNF133Q8WVZ7 376 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 HPS1Q92902 700 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 PGAM5Q96HS1 289 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 IL4I1Q96RQ9 567 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 TEAD3Q99594 435 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 CIB1Q99828 191 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 YIPF3Q9GZM5 350 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 OR10A2Q9H208 303 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 MARCH7Q9H992 704 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 S100A14Q9HCY8 104 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 IMPAD1Q9NX62 359 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 IL19Q9UHD0 177 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 KCNS2Q9ULS6 477 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 NOP16Q9Y3C1 178 aaKnown RBP8.56□□□□□ -1.04
BRCA1-227ENST00000591849 DNHD1Q96M86 4753 aa8.56□□□□□ -1.04
BRCA1-227ENST00000591849 SLC22A31A6NKX4 558 aa8.55□□□□□ -1.04
BRCA1-227ENST00000591849 ZAR1LA6NP61 321 aa8.55□□□□□ -1.04
BRCA1-227ENST00000591849 CD300LBA8K4G0 201 aa8.55□□□□□ -1.04
BRCA1-227ENST00000591849 IQCF6A8MYZ5 107 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms