RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 FJX1Q86VR8 437 aa13.04□□□□□ -0.32
RETREG3-208ENST00000589797 C20orf196Q8IYI0 205 aa13.04□□□□□ -0.32
RETREG3-208ENST00000589797 KCNG3Q8TAE7 436 aa13.04□□□□□ -0.32
RETREG3-208ENST00000589797 FOXRED1Q96CU9 486 aaPredicted RBP13.04□□□□□ -0.32
RETREG3-208ENST00000589797 CPNE2Q96FN4 548 aaPredicted RBP13.04□□□□□ -0.32
RETREG3-208ENST00000589797 RTN4RQ9BZR6 473 aa13.04□□□□□ -0.32
RETREG3-208ENST00000589797 KCNN3Q9UGI6 736 aa13.04□□□□□ -0.32
RETREG3-208ENST00000589797 PNLIPP16233 465 aa13.04□□□□□ -0.32
RETREG3-208ENST00000589797 MFGE8Q08431 387 aaPredicted RBP13.04□□□□□ -0.32
RETREG3-208ENST00000589797 C3AR1Q16581 482 aa13.04□□□□□ -0.32
RETREG3-208ENST00000589797 LTC4SQ16873 150 aa13.04□□□□□ -0.32
RETREG3-208ENST00000589797 CDH20Q9HBT6 801 aa13.04□□□□□ -0.32
RETREG3-208ENST00000589797 SHANK1Q9Y566 2161 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 PYCARD-AS1I3L0S3 204 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 APLNRP35414 380 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 DDOSTP39656 456 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 INSM1Q01101 510 aaPredicted RBP13.03□□□□□ -0.32
RETREG3-208ENST00000589797 ACER2Q5QJU3 275 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 UNQ6126/PRO20091Q6UXV3 157 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 OR52N4Q8NGI2 321 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 LIPHQ8WWY8 451 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 PRRT1Q99946 306 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 POFUT1Q9H488 388 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 ZNF768Q9H5H4 540 aaKnown RBP13.03□□□□□ -0.32
RETREG3-208ENST00000589797 FBXO9Q9UK97 447 aaPredicted RBP13.03□□□□□ -0.32
RETREG3-208ENST00000589797 TRAV1-2A0A0B4J238 106 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 PRAF2O60831 178 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 EPHA1P21709 976 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 GALNSP34059 522 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 THBS2P35442 1172 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 SLC25A1P53007 311 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 SLC25A30Q5SVS4 291 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 SMIM4Q8WVI0 70 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 MCHR2Q969V1 340 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 WDFY2Q96P53 400 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 C7orf50Q9BRJ6 194 aaKnown RBP13.03□□□□□ -0.32
RETREG3-208ENST00000589797 GLTPQ9NZD2 209 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 ZNF205O95201 554 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 ACHEP22303 614 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 ARHGDIBP52566 201 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 CLDN20P56880 219 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 C3P1Q6ZMU1 363 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 PXKQ7Z7A4 578 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 PLPP5Q8NEB5 264 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 ZNF416Q9BWM5 594 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 TAS2R5Q9NYW4 299 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 ZMIZ1Q9ULJ6 1067 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 ANKRD33BA6NCL7 494 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 YKT6O15498 198 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 PHLDA2Q53GA4 152 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 PLXDC2Q6UX71 529 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 COMMD7Q86VX2 200 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 GCNT2Q8N0V5 402 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 GABRG1Q8N1C3 465 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 LILRB4Q8NHJ6 448 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 HAVCR1Q96D42 359 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 NIPAL2Q9H841 368 aa13.03□□□□□ -0.32
RETREG3-208ENST00000589797 PLXND1Q9Y4D7 1925 aa13.02□□□□□ -0.32
RETREG3-208ENST00000589797 IGKV1D-42A0A075B6H8 117 aa13.02□□□□□ -0.32
RETREG3-208ENST00000589797 ZNF705EA8MWA4 302 aaPredicted RBP13.02□□□□□ -0.32
RETREG3-208ENST00000589797 SPRY1O43609 319 aaPredicted RBP13.02□□□□□ -0.32
RETREG3-208ENST00000589797 FBXO24O75426 580 aa13.02□□□□□ -0.32
RETREG3-208ENST00000589797 CBR3O75828 277 aa13.02□□□□□ -0.32
RETREG3-208ENST00000589797 EFNB2P52799 333 aa13.02□□□□□ -0.32
RETREG3-208ENST00000589797 SPATA46Q5T0L3 261 aa13.02□□□□□ -0.32
RETREG3-208ENST00000589797 GVQW1Q8N7I0 195 aa13.02□□□□□ -0.32
RETREG3-208ENST00000589797 ETV7Q9Y603 341 aa13.02□□□□□ -0.32
RETREG3-208ENST00000589797 NXPH3O95157 252 aa13.02□□□□□ -0.33
RETREG3-208ENST00000589797 CD53P19397 219 aa13.02□□□□□ -0.33
RETREG3-208ENST00000589797 OPCMLQ14982 345 aa13.02□□□□□ -0.33
RETREG3-208ENST00000589797 CEBPEQ15744 281 aa13.02□□□□□ -0.33
RETREG3-208ENST00000589797 PCK2Q16822 640 aa13.02□□□□□ -0.33
RETREG3-208ENST00000589797 TIGD3Q6B0B8 471 aa13.02□□□□□ -0.33
RETREG3-208ENST00000589797 ZNF436Q9C0F3 470 aaPredicted RBP13.02□□□□□ -0.33
RETREG3-208ENST00000589797 PPA2Q9H2U2 334 aa13.02□□□□□ -0.33
RETREG3-208ENST00000589797 RAB22AQ9UL26 194 aa13.02□□□□□ -0.33
RETREG3-208ENST00000589797 TRAPPC4Q9Y296 219 aa13.02□□□□□ -0.33
RETREG3-208ENST00000589797 CACNA1BQ00975 2339 aa13.02□□□□□ -0.33
RETREG3-208ENST00000589797 OR4C45A6NMZ5 311 aa13.02□□□□□ -0.33
RETREG3-208ENST00000589797 NFYAP23511 347 aaPredicted RBP13.02□□□□□ -0.33
RETREG3-208ENST00000589797 CAV2P51636 162 aa13.02□□□□□ -0.33
RETREG3-208ENST00000589797 EGR4Q05215 589 aa13.02□□□□□ -0.33
RETREG3-208ENST00000589797 MRPL49Q13405 166 aaKnown RBP13.02□□□□□ -0.33
RETREG3-208ENST00000589797 IL11RAQ14626 422 aa13.02□□□□□ -0.33
RETREG3-208ENST00000589797 YIPF5Q969M3 257 aa13.02□□□□□ -0.33
RETREG3-208ENST00000589797 SLA2Q9H6Q3 261 aa13.02□□□□□ -0.33
RETREG3-208ENST00000589797 ZNF230Q9UIE0 474 aaPredicted RBP13.02□□□□□ -0.33
RETREG3-208ENST00000589797 DUSP13Q9UII6 198 aa13.02□□□□□ -0.33
RETREG3-208ENST00000589797 SF3B6Q9Y3B4 125 aaKnown RBP13.02□□□□□ -0.33
RETREG3-208ENST00000589797 PCP4L1A6NKN8 68 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 CXCL3P19876 107 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 HRH1P35367 487 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 GZMKP49863 264 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 PMS2CLQ68D20 193 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 FAM219AQ8IW50 185 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 SULF2Q8IWU5 870 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 UBALD1Q8TB05 177 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 RNF128Q8TEB7 428 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 LRFN5Q96NI6 719 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 PCDHB16Q9NRJ7 776 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms