RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 GABRA1P14867 456 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 FOSL2P15408 326 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 BDKRB2P30411 391 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 SNTB1Q13884 538 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 PHLDA2Q53GA4 152 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 P4HA3Q7Z4N8 544 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 OR52N4Q8NGI2 321 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 OR1L3Q8NH93 324 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 ZNF649Q9BS31 505 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 ZNF442Q9H7R0 627 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 MRPS28Q9Y2Q9 187 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 TRAV1-2A0A0B4J238 106 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 A0A1B0GUH1 482 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 STMND1H3BQB6 276 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 LDOC1O95751 146 aaPredicted RBP12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 KLK3P07288 261 aaPredicted RBP12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 POLR2HP52434 150 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 FOXF1Q12946 379 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 RAB11FIP2Q7L804 512 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 CPEB2Q7Z5Q1 589 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 ISOC2Q96AB3 205 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 FOXRED1Q96CU9 486 aaPredicted RBP12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 RAB3CQ96E17 227 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 C4orf45Q96LM5 186 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 PFDN5Q99471 154 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 KCNJ15Q99712 375 aa12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 C14orf166Q9Y224 244 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-209ENST00000587525 RPS10-NUDT3A0A1W2PQS6 291 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 CTAG2O75638 210 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 VSIG10L2P0DP72 767 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 ATP1B3P54709 279 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 ACACAQ13085 2346 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 SLC25A30Q5SVS4 291 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 FAM71CQ8NEG0 241 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 SEMA6DQ8NFY4 1073 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 ELP5Q8TE02 316 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 TCEAL3Q969E4 200 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 LIN37Q96GY3 246 aaPredicted RBP12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 VN1R1Q9GZP7 353 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 GPR84Q9NQS5 396 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 MOKQ9UQ07 419 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 PI4KAP42356 2102 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 GLSO94925 669 aaPredicted RBP12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 THBS2P35442 1172 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 HSF1Q00613 529 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 SP6Q3SY56 376 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 MOGAT2Q3SYC2 334 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 ZNF658BQ4V348 819 aaPredicted RBP12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 OTOSQ8NHW6 89 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 TTC9Q92623 222 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 SLAMF6Q96DU3 332 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 RTN4RQ9BZR6 473 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 MRPS18AQ9NVS2 196 aaKnown RBP12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 MTRF1O75570 445 aaKnown RBP12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 ADAP1O75689 374 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 CPT2P23786 658 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 SLC6A8P48029 635 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 RPS4XP62701 263 aaKnown RBP12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 TLE1Q04724 770 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 KLF9Q13886 244 aaPredicted RBP12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 TMEM244Q5VVB8 128 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 OR2W3Q7Z3T1 314 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 UBALD1Q8TB05 177 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 SLAMF9Q96A28 289 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 GNRHR2Q96P88 292 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 TMEM59Q9BXS4 323 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 PRELID3BQ9Y3B1 194 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 ZNF175Q9Y473 711 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 PUS1Q9Y606 427 aaKnown RBP eCLIP12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 KIAA2026Q5HYC2 2103 aa12.34□□□□□ -0.43
CACNA1A-209ENST00000587525 TMEM272A0A1B0GTI8 110 aa12.33□□□□□ -0.43
CACNA1A-209ENST00000587525 PTBP1P26599 531 aaKnown RBP eCLIP12.33□□□□□ -0.43
CACNA1A-209ENST00000587525 SERPINF1P36955 418 aa12.33□□□□□ -0.43
CACNA1A-209ENST00000587525 OR14L1PQ8NHC6 308 aa12.33□□□□□ -0.43
CACNA1A-209ENST00000587525 ZNF845Q96IR2 970 aaPredicted RBP12.33□□□□□ -0.43
CACNA1A-209ENST00000587525 TGIF2Q9GZN2 237 aa12.33□□□□□ -0.43
CACNA1A-209ENST00000587525 C1orf198Q9H425 327 aa12.33□□□□□ -0.43
CACNA1A-209ENST00000587525 C8orf33Q9H7E9 229 aaPredicted RBP12.33□□□□□ -0.43
CACNA1A-209ENST00000587525 KIF25Q9UIL4 384 aa12.33□□□□□ -0.43
CACNA1A-209ENST00000587525 RALGAPA1Q6GYQ0 2036 aa12.33□□□□□ -0.43
CACNA1A-209ENST00000587525 OR4C45A6NMZ5 311 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 GDF9O60383 454 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 CAV2P51636 162 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 H2BFSP57053 126 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 NKAIN1Q4KMZ8 207 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 AVPI1Q5T686 147 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 SLC39A7Q92504 469 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 DDIT4LQ96D03 193 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 URM1Q9BTM9 101 aaKnown RBP12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 ZNF629Q9UEG4 869 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 LOC101059948A0A1B0GTJ6 334 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 SCGNO76038 276 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 LY86O95711 162 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 EPHA1P21709 976 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 BTCP35070 178 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 GPR3P46089 330 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 RPS10P46783 165 aaKnown RBP12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 TAF9Q16594 264 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 RGP1Q92546 391 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 CDC6Q99741 560 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms