RNA–Protein interactions for RNA: ENST00000587425.5

TCF3-211, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-211ENST00000587425 NEIL1Q96FI4 390 aaPredicted RBP12.74□□□□□ -0.37
TCF3-211ENST00000587425 PYURFQ96I23 114 aa12.74□□□□□ -0.37
TCF3-211ENST00000587425 ATF6BQ99941 703 aa12.74□□□□□ -0.37
TCF3-211ENST00000587425 ZNF747Q9BV97 191 aa12.74□□□□□ -0.37
TCF3-211ENST00000587425 CDADC1Q9BWV3 514 aa12.74□□□□□ -0.37
TCF3-211ENST00000587425 HCAR1Q9BXC0 346 aa12.74□□□□□ -0.37
TCF3-211ENST00000587425 MYLK2Q9H1R3 596 aa12.74□□□□□ -0.37
TCF3-211ENST00000587425 PNRC2Q9NPJ4 139 aaKnown RBP12.74□□□□□ -0.37
TCF3-211ENST00000587425 TNFRSF19Q9NS68 423 aa12.74□□□□□ -0.37
TCF3-211ENST00000587425 CMYA5Q8N3K9 4069 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 J3QW42 95 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 KCNAB3O43448 404 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 FAM20BO75063 409 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 GMNNO75496 209 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 SEMG1P04279 462 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 PSKH1P11801 424 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 NOS3P29474 1203 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 RRM2P31350 389 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 GGT2P36268 569 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 PITPNBP48739 271 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 MAB21L1Q13394 359 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 MPPED2Q15777 294 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 KRTAP27-1Q3LI81 207 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 PGM2L1Q6PCE3 622 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 BTNL3Q6UXE8 466 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 BRD3OSQ6XYD6 125 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 COLCA1Q6ZS62 124 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 CYB561A3Q8NBI2 242 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 OR8B3Q8NGG8 313 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 OR2AJ1Q8NGZ0 328 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 RAB40AQ8WXH6 277 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 CMTM5Q96DZ9 223 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 MAP6Q96JE9 813 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 OR8B2Q96RD0 313 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 NSRP1Q9H0G5 558 aaKnown RBP12.73□□□□□ -0.37
TCF3-211ENST00000587425 EGLN3Q9H6Z9 239 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 MRPL22Q9NWU5 206 aaKnown RBP12.73□□□□□ -0.37
TCF3-211ENST00000587425 MIOXQ9UGB7 285 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 TMCC3Q9ULS5 477 aa12.73□□□□□ -0.37
TCF3-211ENST00000587425 TVP23AA6NH52 213 aa12.72□□□□□ -0.37
TCF3-211ENST00000587425 LRRC30A6NM36 301 aa12.72□□□□□ -0.37
TCF3-211ENST00000587425 IFNL4K9M1U5 179 aa12.72□□□□□ -0.37
TCF3-211ENST00000587425 CA6P23280 308 aa12.72□□□□□ -0.37
TCF3-211ENST00000587425 OMGP23515 440 aa12.72□□□□□ -0.37
TCF3-211ENST00000587425 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.72□□□□□ -0.37
TCF3-211ENST00000587425 SNAI3Q3KNW1 292 aa12.72□□□□□ -0.37
TCF3-211ENST00000587425 RUSC1-AS1Q66K80 236 aa12.72□□□□□ -0.37
TCF3-211ENST00000587425 OR51L1Q8NGJ5 315 aa12.72□□□□□ -0.37
TCF3-211ENST00000587425 OR10S1Q8NGN2 331 aa12.72□□□□□ -0.37
TCF3-211ENST00000587425 OR2AE1Q8NHA4 323 aa12.72□□□□□ -0.37
TCF3-211ENST00000587425 SPRYD4Q8WW59 207 aaPredicted RBP12.72□□□□□ -0.37
TCF3-211ENST00000587425 ZNRF4Q8WWF5 429 aa12.72□□□□□ -0.37
TCF3-211ENST00000587425 DACT3Q96B18 629 aaPredicted RBP12.72□□□□□ -0.37
TCF3-211ENST00000587425 UPRTQ96BW1 309 aa12.72□□□□□ -0.37
TCF3-211ENST00000587425 PLEKHA8Q96JA3 519 aa12.72□□□□□ -0.37
TCF3-211ENST00000587425 MMADHCQ9H3L0 296 aaPredicted RBP12.72□□□□□ -0.37
TCF3-211ENST00000587425 UNKLQ9H9P5 680 aaKnown RBP12.72□□□□□ -0.37
TCF3-211ENST00000587425 CYB5R1Q9UHQ9 305 aa12.72□□□□□ -0.37
TCF3-211ENST00000587425 N6AMT1Q9Y5N5 214 aa12.72□□□□□ -0.37
TCF3-211ENST00000587425 C22orf46C9J442 243 aa12.71□□□□□ -0.37
TCF3-211ENST00000587425 ARPC3O15145 178 aa12.71□□□□□ -0.37
TCF3-211ENST00000587425 RNASE1P07998 156 aaKnown RBP12.71□□□□□ -0.37
TCF3-211ENST00000587425 IRF2P14316 349 aa12.71□□□□□ -0.37
TCF3-211ENST00000587425 FGF12P61328 243 aa12.71□□□□□ -0.37
TCF3-211ENST00000587425 OR8G1Q15617 311 aa12.71□□□□□ -0.37
TCF3-211ENST00000587425 SLC36A3Q495N2 470 aa12.71□□□□□ -0.37
TCF3-211ENST00000587425 SFRP4Q6FHJ7 346 aaPredicted RBP12.71□□□□□ -0.37
TCF3-211ENST00000587425 SHISA2Q6UWI4 295 aa12.71□□□□□ -0.37
TCF3-211ENST00000587425 LRRN1Q6UXK5 716 aa12.71□□□□□ -0.37
TCF3-211ENST00000587425 ZNF620Q6ZNG0 422 aa12.71□□□□□ -0.37
TCF3-211ENST00000587425 PGAP1Q75T13 922 aa12.71□□□□□ -0.37
TCF3-211ENST00000587425 NLRC3Q7RTR2 1065 aa12.71□□□□□ -0.37
TCF3-211ENST00000587425 MRPL21Q7Z2W9 205 aaKnown RBP12.71□□□□□ -0.37
TCF3-211ENST00000587425 ZBTB46Q86UZ6 589 aa12.71□□□□□ -0.37
TCF3-211ENST00000587425 C1orf87Q8N0U7 546 aa12.71□□□□□ -0.37
TCF3-211ENST00000587425 LNX2Q8N448 690 aa12.71□□□□□ -0.37
TCF3-211ENST00000587425 SLC25A28Q96A46 364 aa12.71□□□□□ -0.37
TCF3-211ENST00000587425 NUDT16L1Q9BRJ7 211 aaKnown RBP12.71□□□□□ -0.37
TCF3-211ENST00000587425 GORASP2Q9H8Y8 452 aa12.71□□□□□ -0.37
TCF3-211ENST00000587425 CLN8Q9UBY8 286 aa12.71□□□□□ -0.37
TCF3-211ENST00000587425 C3orf80F5H4A9 247 aa12.7□□□□□ -0.38
TCF3-211ENST00000587425 M0R135 149 aa12.7□□□□□ -0.38
TCF3-211ENST00000587425 ARPC2O15144 300 aa12.7□□□□□ -0.38
TCF3-211ENST00000587425 HOXA3O43365 443 aaPredicted RBP12.7□□□□□ -0.38
TCF3-211ENST00000587425 PLATP00750 562 aa12.7□□□□□ -0.38
TCF3-211ENST00000587425 FABP3P05413 133 aa12.7□□□□□ -0.38
TCF3-211ENST00000587425 SLC2A1P11166 492 aa12.7□□□□□ -0.38
TCF3-211ENST00000587425 MDKP21741 143 aaPredicted RBP12.7□□□□□ -0.38
TCF3-211ENST00000587425 GSSP48637 474 aa12.7□□□□□ -0.38
TCF3-211ENST00000587425 RAD23AP54725 363 aa12.7□□□□□ -0.38
TCF3-211ENST00000587425 SMIM11AP58511 58 aa12.7□□□□□ -0.38
TCF3-211ENST00000587425 MALLQ13021 153 aa12.7□□□□□ -0.38
TCF3-211ENST00000587425 ZNF181Q2M3W8 571 aa12.7□□□□□ -0.38
TCF3-211ENST00000587425 DEFB112Q30KQ8 113 aa12.7□□□□□ -0.38
TCF3-211ENST00000587425 WDR25Q64LD2 544 aaPredicted RBP12.7□□□□□ -0.38
TCF3-211ENST00000587425 PGBD2Q6P3X8 592 aa12.7□□□□□ -0.38
TCF3-211ENST00000587425 SPATC1Q76KD6 591 aa12.7□□□□□ -0.38
TCF3-211ENST00000587425 FITM2Q8N6M3 262 aa12.7□□□□□ -0.38
TCF3-211ENST00000587425 PROKR2Q8NFJ6 384 aa12.7□□□□□ -0.38
TCF3-211ENST00000587425 OR9Q2Q8NGE9 314 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms