RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 FNDC8Q8TC99 324 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 RAB40AQ8WXH6 277 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 UPRTQ96BW1 309 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 DUS3LQ96G46 650 aaKnown RBP9.7□□□□□ -0.86
LIG3-207ENST00000586119 TSSK2Q96PF2 358 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 FNDC11Q9BVV2 318 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 CDADC1Q9BWV3 514 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 NDUFAF4Q9P032 175 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 ASH2LQ9UBL3 628 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 GRHPRQ9UBQ7 328 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 KIR2DS1A0A191URI9 304 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 PRSS37A4D1T9 235 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 FAM181BA6NEQ2 426 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 CLDN34H7C241 214 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 DCTN6O00399 190 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 PTP4A3O75365 173 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 CD14P08571 375 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 RAC2P15153 192 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 CDKN2AP42771 156 aaKnown RBP9.69□□□□□ -0.86
LIG3-207ENST00000586119 ACTR3P61158 418 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 FGF12P61328 243 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 ZBED5Q49AG3 693 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 FAM205BPQ63HN1 556 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 CORO6Q6QEF8 472 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 LRRN1Q6UXK5 716 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 ZNF730Q6ZMV8 503 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 C9orf139Q6ZV77 190 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 ZDHHC21Q8IVQ6 265 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 ADGRG5Q8IZF4 528 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 BHLHE23Q8NDY6 225 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 OR8G5Q8NG78 346 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 RSRC1Q96IZ7 334 aaKnown RBP9.69□□□□□ -0.86
LIG3-207ENST00000586119 DHRS1Q96LJ7 313 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 NUDT16L1Q9BRJ7 211 aaKnown RBP9.69□□□□□ -0.86
LIG3-207ENST00000586119 NUAK2Q9H093 628 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 SYT4Q9H2B2 425 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 RASSF4Q9H2L5 321 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 MARCH7Q9H992 704 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 ZMAT3Q9HA38 289 aaKnown RBP9.69□□□□□ -0.86
LIG3-207ENST00000586119 LRCH1Q9Y2L9 728 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 V9GYQ6 96 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 VWFP04275 2813 aa9.69□□□□□ -0.86
LIG3-207ENST00000586119 A0A1W2PRQ8 180 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 C22orf46C9J442 243 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 SOCS2O14508 198 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 SURF4O15260 269 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 KHDRBS3O75525 346 aaKnown RBP9.68□□□□□ -0.86
LIG3-207ENST00000586119 KRT36O76013 467 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 H1F0P07305 194 aaKnown RBP9.68□□□□□ -0.86
LIG3-207ENST00000586119 ANOS1P23352 680 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 MTNR1AP48039 350 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 FXYD6P3P58550 94 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 MAB21L1Q13394 359 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 AQP6Q13520 282 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 DGCR6Q14129 220 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 ZNF404Q494X3 552 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 FIP1L1Q6UN15 594 aaKnown RBP9.68□□□□□ -0.86
LIG3-207ENST00000586119 BTNL3Q6UXE8 466 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 FBXW12Q6X9E4 464 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 ZNF841Q6ZN19 808 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 TMPRSS11FQ6ZWK6 438 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 MBOAT2Q6ZWT7 520 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 RNF113BQ8IZP6 322 aaKnown RBP9.68□□□□□ -0.86
LIG3-207ENST00000586119 MUC20Q8N307 709 aaPredicted RBP9.68□□□□□ -0.86
LIG3-207ENST00000586119 OR13G1Q8NGZ3 307 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 CANT1Q8WVQ1 401 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 ACOT11Q8WXI4 607 aaPredicted RBP9.68□□□□□ -0.86
LIG3-207ENST00000586119 ZDHHC16Q969W1 377 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 NEIL1Q96FI4 390 aaPredicted RBP9.68□□□□□ -0.86
LIG3-207ENST00000586119 FAM46AQ96IP4 442 aaKnown RBP9.68□□□□□ -0.86
LIG3-207ENST00000586119 ZNF570Q96NI8 536 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 SLC30A2Q9BRI3 323 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 CHID1Q9BWS9 393 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 SLITRK2Q9H156 845 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 NMNAT1Q9HAN9 279 aaPredicted RBP9.68□□□□□ -0.86
LIG3-207ENST00000586119 MIOXQ9UGB7 285 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 AURKCQ9UQB9 309 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 IER3IP1Q9Y5U9 82 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 LHFPL6Q9Y693 200 aa9.68□□□□□ -0.86
LIG3-207ENST00000586119 XKRYO14609 159 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 SFTPBP07988 381 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 TUBG1P23258 451 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 CENPAP49450 140 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 HMGA2P52926 109 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 KRR1Q13601 381 aaKnown RBP9.67□□□□□ -0.86
LIG3-207ENST00000586119 MPPED2Q15777 294 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 PRAMEF6Q5VXH4 476 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 WDR25Q64LD2 544 aaPredicted RBP9.67□□□□□ -0.86
LIG3-207ENST00000586119 ZFP1Q6P2D0 407 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 Q6YL49 198 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 ZNF582Q96NG8 517 aaPredicted RBP9.67□□□□□ -0.86
LIG3-207ENST00000586119 WACQ9BTA9 647 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 CHIAQ9BZP6 476 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 PRDM13Q9H4Q3 707 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 NRIP3Q9NQ35 241 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 TUBG2Q9NRH3 451 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 UFSP2Q9NUQ7 469 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 ARMC1Q9NVT9 282 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 C1RLQ9NZP8 487 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 TMCC3Q9ULS5 477 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms