RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 ISG15P05161 165 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 CECR9P0C854 216 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 GALP22466 123 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 ANOS1P23352 680 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 PSMA1P25786 263 aaKnown RBP13.99□□□□□ -0.17
SS18-226ENST00000585241 TRAM1Q15629 374 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 TBC1D28Q2M2D7 210 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 BCL2L15Q5TBC7 163 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 ANKRD13BQ86YJ7 626 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 MS4A15Q8N5U1 240 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 OR8B12Q8NGG6 310 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 OR1J2Q8NGS2 313 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 GHSRQ92847 366 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 FUNDC2Q9BWH2 189 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 SP140LQ9H930 580 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 NPAP1Q9NZP6 1156 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 SLC22A13Q9Y226 551 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 IGHV1-18A0A0C4DH31 117 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 A0A0U1RQV5 110 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 PNMA8CA0A1B0GUJ8 204 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 C5orf49A4QMS7 147 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 SC5DO75845 299 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 THBDP07204 575 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 UBCP0CG48 685 aaKnown RBP13.98□□□□□ -0.17
SS18-226ENST00000585241 SLC2A1P11166 492 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 CCL1P22362 96 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 SLC6A9P48067 706 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 RPS11P62280 158 aaKnown RBP eCLIP13.98□□□□□ -0.17
SS18-226ENST00000585241 RPS25P62851 125 aaKnown RBP13.98□□□□□ -0.17
SS18-226ENST00000585241 SLC3A1Q07837 685 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 YIF1BQ5BJH7 314 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 ZNF704Q6ZNC4 412 aaPredicted RBP13.98□□□□□ -0.17
SS18-226ENST00000585241 Q6ZSR3 168 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 FAM57BQ71RH2 274 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 NAA40Q86UY6 237 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 OR52H1Q8NGJ2 320 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 OR5AK2Q8NH90 309 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 RGP1Q92546 391 aaPredicted RBP13.98□□□□□ -0.17
SS18-226ENST00000585241 PPP1R14AQ96A00 147 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 PDCD1LG2Q9BQ51 273 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 TBCCD1Q9NVR7 557 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 NDUFA13Q9P0J0 144 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 ZNF319Q9P2F9 582 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 ENPP5Q9UJA9 477 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 ZNF281Q9Y2X9 895 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 CEPT1Q9Y6K0 416 aa13.98□□□□□ -0.17
SS18-226ENST00000585241 RELNP78509 3460 aa13.97□□□□□ -0.17
SS18-226ENST00000585241 TRBV5-5A0A0J9YX44 114 aa13.97□□□□□ -0.17
SS18-226ENST00000585241 WIPF3A6NGB9 483 aa13.97□□□□□ -0.17
SS18-226ENST00000585241 GABARAPO95166 117 aa13.97□□□□□ -0.17
SS18-226ENST00000585241 ANXA2P07355 339 aaKnown RBP13.97□□□□□ -0.17
SS18-226ENST00000585241 ZNF35P13682 527 aa13.97□□□□□ -0.17
SS18-226ENST00000585241 ACHEP22303 614 aa13.97□□□□□ -0.17
SS18-226ENST00000585241 PCSK6P29122 969 aa13.97□□□□□ -0.17
SS18-226ENST00000585241 WNT5AP41221 380 aa13.97□□□□□ -0.17
SS18-226ENST00000585241 CRYBB2P43320 205 aa13.97□□□□□ -0.17
SS18-226ENST00000585241 TIMM50Q3ZCQ8 353 aa13.97□□□□□ -0.17
SS18-226ENST00000585241 TMEM244Q5VVB8 128 aa13.97□□□□□ -0.17
SS18-226ENST00000585241 GDPGP1Q6ZNW5 385 aa13.97□□□□□ -0.17
SS18-226ENST00000585241 SLC16A12Q6ZSM3 486 aa13.97□□□□□ -0.17
SS18-226ENST00000585241 PAQR4Q8N4S7 273 aaPredicted RBP13.97□□□□□ -0.17
SS18-226ENST00000585241 PGAM5Q96HS1 289 aa13.97□□□□□ -0.17
SS18-226ENST00000585241 BCL7BQ9BQE9 202 aa13.97□□□□□ -0.17
SS18-226ENST00000585241 COMMD4Q9H0A8 199 aa13.97□□□□□ -0.17
SS18-226ENST00000585241 STUB1Q9UNE7 303 aa13.97□□□□□ -0.17
SS18-226ENST00000585241 A0A1B0GTI1 187 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 TRDV1A0A1B0GX56 115 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 C5orf63A6NC05 138 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 H3BSA7 217 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 HLA-DPB1P04440 258 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 EPXP11678 715 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 CCL2P13500 99 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 GADD45AP24522 165 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 GRNP28799 593 aaKnown RBP13.96□□□□□ -0.17
SS18-226ENST00000585241 TMBIM6P55061 237 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 NAAAQ02083 359 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 SNAI3Q3KNW1 292 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 GPR107Q5VW38 600 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 ZNF676Q8N7Q3 588 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 PLPP7Q8NBV4 271 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 ZNF420Q8TAQ5 688 aaPredicted RBP13.96□□□□□ -0.17
SS18-226ENST00000585241 SPSB4Q96A44 273 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 APOBEC3DQ96AK3 386 aaPredicted RBP13.96□□□□□ -0.17
SS18-226ENST00000585241 WFIKKN1Q96NZ8 548 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 C1QTNF6Q9BXI9 259 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 OR10A2Q9H208 303 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 RGCCQ9H4X1 137 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 CDH20Q9HBT6 801 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 BRD7Q9NPI1 651 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 NPDC1Q9NQX5 325 aaPredicted RBP13.96□□□□□ -0.17
SS18-226ENST00000585241 ZNF391Q9UJN7 358 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 RALYQ9UKM9 306 aaKnown RBP13.96□□□□□ -0.17
SS18-226ENST00000585241 GTF2A1LQ9UNN4 478 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 HCFC1P51610 2035 aa13.96□□□□□ -0.17
SS18-226ENST00000585241 SPTBN1Q01082 2364 aaKnown RBP13.96□□□□□ -0.18
SS18-226ENST00000585241 IGHV2OR16-5A0A0B4J2B6 119 aa13.95□□□□□ -0.18
SS18-226ENST00000585241 LOC107986453A0A1B0GWG9 222 aa13.95□□□□□ -0.18
SS18-226ENST00000585241 ZNF701M0R085 212 aaPredicted RBP13.95□□□□□ -0.18
SS18-226ENST00000585241 XRCC2O43543 280 aa13.95□□□□□ -0.18
SS18-226ENST00000585241 GPX5O75715 221 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms