RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 SNTNA6NMZ2 147 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 NPIPB4C9JG80 1138 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 LRRN3E7EW58 273 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 C11orf98E9PRG8 122 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 PPIAL4DF5H284 164 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 RNF13O43567 381 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 ENTPD6O75354 484 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 CD14P08571 375 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 PATE4P0C8F1 98 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 PPIAL4FP0DN26 164 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 JUNBP17275 347 aaPredicted RBP9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 FMO3P31513 532 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 LIPAP38571 399 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 RPL5P46777 297 aaKnown RBP9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 ZNF81P51508 661 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 HSF2Q03933 536 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 TMED1Q13445 227 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 SMN1Q16637 294 aaKnown RBP9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 TSTQ16762 297 aaKnown RBP9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 CLEC12AQ5QGZ9 265 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 RNLSQ5VYX0 342 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 GPR139Q6DWJ6 353 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 PRSS48Q7RTY5 328 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 HDDC2Q7Z4H3 204 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 ZNF584Q8IVC4 421 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 CCL17Q92583 94 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 GGHQ92820 318 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 RFKQ969G6 155 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 MYDGFQ969H8 173 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 IL4I1Q96RQ9 567 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 DDOQ99489 341 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 SH3GL3Q99963 347 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 IFT27Q9BW83 186 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 CYSLTR2Q9NS75 346 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 PAK1IP1Q9NWT1 392 aaPredicted RBP9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 AASSQ9UDR5 926 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 RPL36Q9Y3U8 105 aaKnown RBP9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 PPIAL4AQ9Y536 164 aa9.12□□□□□ -0.95
CSNK1D-226ENST00000585026 POM121CA8CG34 1229 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 MCIDASD6RGH6 385 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 BLOC1S5-TXNDC5H3BN57 136 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 PRODHO43272 600 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 XPNPEP2O43895 674 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 IGHV3-13P01766 116 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 IGHG1P01857 330 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 HTR1AP08908 422 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 PRTN3P24158 256 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 AQP2P41181 271 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 ALDH3B2P48448 385 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 CLRN1P58418 232 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 RPL18Q07020 188 aaKnown RBP9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 ZNF718Q3SXZ3 478 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 ALG10Q5BKT4 473 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 ZMAT1Q5H9K5 638 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 ARMCX4Q5H9R4 360 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 NXNL2Q5VZ03 156 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 LRFN4Q6PJG9 635 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 FAM122BQ7Z309 247 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 NANOGNBQ7Z5D8 188 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 SPARTQ8N0X7 666 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 OR1J1Q8NGS3 322 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 MOSPD2Q8NHP6 518 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 FGFBP3Q8TAT2 258 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 PTP4A1Q93096 173 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 PLEKHA8Q96JA3 519 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 ZNF582Q96NG8 517 aaPredicted RBP9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 DIRC2Q96SL1 478 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 CDCA4Q9BXL8 241 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 OR51B6Q9H340 312 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 ESM1Q9NQ30 184 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 CGGBP1Q9UFW8 167 aaPredicted RBP9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 IL20RAQ9UHF4 553 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 KLHL21Q9UJP4 597 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.11□□□□□ -0.953e-7■■■□□ 17.6
CSNK1D-226ENST00000585026 IER3IP1Q9Y5U9 82 aa9.11□□□□□ -0.95
CSNK1D-226ENST00000585026 IRGMA1A4Y4 181 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 RIIAD1A6NNX1 92 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 CENPBD1B2RD01 187 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 PTGES3LE9PB15 166 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 RGS10O43665 173 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 FAM20BO75063 409 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 PPP1R3DO95685 299 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 IFNGP01579 166 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 IGHMP01871 453 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 CDK1P06493 297 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 QDPRP09417 244 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 NR2C1P13056 603 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 CCL2P13500 99 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 CCNOP22674 350 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 EEF1B2P24534 225 aaKnown RBP9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 HTR1FP30939 366 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 SDHAP31040 664 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 RPL4P36578 427 aaKnown RBP9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 CTXN1P60606 82 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 IL13RA1P78552 427 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 LCN2P80188 198 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 PDLIM3Q53GG5 364 aaPredicted RBP9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 KLHL22Q53GT1 634 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 ARMC4Q5T2S8 1044 aa9.1□□□□□ -0.95
CSNK1D-226ENST00000585026 DOK3Q7L591 496 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms