RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 RNF7Q9UBF6 113 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 FBLN5Q9UBX5 448 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 VPREB3Q9UKI3 123 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 COA3Q9Y2R0 106 aaPredicted RBP8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 V9GYY5 206 aaPredicted RBP8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 TENM3Q9P273 2699 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 NOTCH3Q9UM47 2321 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 PLXNB1O43157 2135 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 EFCAB9A8MZ26 197 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 XKRYO14609 159 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 CDC42EP2O14613 210 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 ANGPT2O15123 496 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 ADAM20O43506 726 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 OR10H3O60404 316 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 SLC16A7O60669 478 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 KHDRBS3O75525 346 aaKnown RBP8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 ECDO95905 644 aaPredicted RBP8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 RPL4P36578 427 aaKnown RBP8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 NFYCQ13952 458 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 HERPUD1Q15011 391 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 CDONQ4KMG0 1287 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 PRAMEF6Q5VXH4 476 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 METAP1DQ6UB28 335 aaPredicted RBP8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 BTN2A1Q7KYR7 527 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 PDZD9Q8IXQ8 264 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 RNF113BQ8IZP6 322 aaKnown RBP8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 GALNT4Q8N4A0 578 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 PLPP7Q8NBV4 271 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 GJC3Q8NFK1 279 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 OR13C2Q8NGS9 318 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 CFHR4Q92496 578 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 PPP1R14AQ96A00 147 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 PRRC1Q96M27 445 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 COQ7Q99807 217 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 FN3KRPQ9HA64 309 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 RAB21Q9UL25 225 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 FAM96BQ9Y3D0 163 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 KPTNQ9Y664 436 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 LHFPL6Q9Y693 200 aa8.2□□□□□ -1.1
CALCOCO2-227ENST00000575560 TET2Q6N021 2002 aaPredicted RBP8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 TRAV38-1A0A0B4J264 116 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 A0A1B0GVI7 797 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 ELOVL7A1L3X0 281 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 OOEPA6NGQ2 149 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 RNASEK-C17orf49H0YIS7 233 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 DVL1O14640 695 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 IMPA2O14732 288 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 FFAR1O14842 300 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 PTP4A3O75365 173 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 LHBP01229 141 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 IFNA14P01570 189 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 FBP1P09467 338 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 LOXL3P58215 753 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 ZBED5Q49AG3 693 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 CYBRD1Q53TN4 286 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 RABL3Q5HYI8 236 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 BEND6Q5SZJ8 279 aaPredicted RBP8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 TMPRSS11FQ6ZWK6 438 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 VMO1Q7Z5L0 202 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 NAA40Q86UY6 237 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 FAM90A1Q86YD7 464 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 LY6G5BQ8NDX9 201 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 MRAPQ8TCY5 172 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 DMRTB1Q96MA1 342 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 ZNF583Q96ND8 569 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 ZNF570Q96NI8 536 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 NUAK2Q9H093 628 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 HDHD2Q9H0R4 259 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 SYT4Q9H2B2 425 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 SEMA6AQ9H2E6 1030 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 RERGLQ9H628 205 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 TRIM36Q9NQ86 728 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 VSX1Q9NZR4 365 aaPredicted RBP8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 KAAG1Q9UBP8 84 aa8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 RPUSD1Q9UJJ7 312 aaKnown RBP8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 CAB39Q9Y376 341 aaPredicted RBP8.19□□□□□ -1.1
CALCOCO2-227ENST00000575560 A0A087WUU8 490 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 GMDSO60547 372 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 GYPAP02724 150 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 ACSM4P0C7M7 580 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 CA6P23280 308 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 SDHAP31040 664 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 IFNA8P32881 189 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 KDELR2P33947 212 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 KIR2DS4P43632 304 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 EFNB2P52799 333 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 SELENOWP63302 87 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 CYLC2Q14093 348 aaPredicted RBP8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 TRAM2Q15035 370 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 OR8B8Q15620 311 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 OXLD1Q5BKU9 147 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 TEX36Q5VZQ5 186 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 CORO6Q6QEF8 472 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 TBPL2Q6SJ96 375 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 Q6ZTK2 550 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 MBOAT2Q6ZWT7 520 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 PGAP1Q75T13 922 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 OFCC1Q8IZS5 231 aa8.18□□□□□ -1.1
CALCOCO2-227ENST00000575560 BOLLQ8N9W6 283 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms