RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 ATF6BQ99941 703 aa12.96□□□□□ -0.33
TSR1-202ENST00000571806 KCTD14Q9BQ13 255 aaPredicted RBP12.96□□□□□ -0.33
TSR1-202ENST00000571806 NDUFAF4Q9P032 175 aa12.96□□□□□ -0.33
TSR1-202ENST00000571806 ARMCX1Q9P291 453 aa12.96□□□□□ -0.33
TSR1-202ENST00000571806 B9D1Q9UPM9 204 aa12.96□□□□□ -0.33
TSR1-202ENST00000571806 SAMD4AQ9UPU9 718 aaKnown RBP12.96□□□□□ -0.33
TSR1-202ENST00000571806 DOCK11Q5JSL3 2073 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 IGLV1-36A0A0B4J1U3 117 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 IDH3BO43837 385 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 GMDSO60547 372 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 GMNNO75496 209 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 PPP1R3DO95685 299 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 HLA-DPB1P04440 258 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 ACSM4P0C7M7 580 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 SLC6A6P31641 620 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 PMELP40967 661 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 GSK3BP49841 420 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 TPTEP56180 551 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 MAB21L1Q13394 359 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 GK2Q14410 553 aaPredicted RBP12.95□□□□□ -0.34
TSR1-202ENST00000571806 RSPO1Q2MKA7 263 aaPredicted RBP12.95□□□□□ -0.34
TSR1-202ENST00000571806 RFX4Q33E94 735 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 OTPQ5XKR4 325 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 CGB2Q6NT52 195 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 C8orf82Q6P1X6 216 aaPredicted RBP12.95□□□□□ -0.34
TSR1-202ENST00000571806 Q6YL49 198 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 C17orf107Q6ZR85 190 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 PGAP1Q75T13 922 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 TSEN54Q7Z6J9 526 aaKnown RBP12.95□□□□□ -0.34
TSR1-202ENST00000571806 OR6V1Q8N148 313 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 SLC26A10Q8NG04 563 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 SPRYD4Q8WW59 207 aaPredicted RBP12.95□□□□□ -0.34
TSR1-202ENST00000571806 FN3KRPQ9HA64 309 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 SRA1Q9HD15 236 aaKnown RBP12.95□□□□□ -0.34
TSR1-202ENST00000571806 ERVK-18Q9QC07 812 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 KCNG2Q9UJ96 466 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 POMT1Q9Y6A1 747 aa12.95□□□□□ -0.34
TSR1-202ENST00000571806 F5H5K5 113 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 P2RY10O00398 339 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 DCTN6O00399 190 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 LCATP04180 440 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 H2AFXP16104 143 aaPredicted RBP12.94□□□□□ -0.34
TSR1-202ENST00000571806 NOS3P29474 1203 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 FXYD6P3P58550 94 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 FGF12P61328 243 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 DEFA6Q01524 100 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 MZT1Q08AG7 82 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 MEP1BQ16820 701 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 DEFB112Q30KQ8 113 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 SLC18B1Q6NT16 456 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 CORO6Q6QEF8 472 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 BRD3OSQ6XYD6 125 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 ZNF841Q6ZN19 808 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.94□□□□□ -0.34
TSR1-202ENST00000571806 ZBTB46Q86UZ6 589 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 PNLDC1Q8NA58 520 aaKnown RBP12.94□□□□□ -0.34
TSR1-202ENST00000571806 SPERTQ8NA61 448 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 SPTSSAQ969W0 71 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 C7orf34Q96L11 122 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 DHRS1Q96LJ7 313 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 TSSK2Q96PF2 358 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 WDR76Q9H967 626 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 DCAF13Q9NV06 445 aaKnown RBP12.94□□□□□ -0.34
TSR1-202ENST00000571806 GMPR2Q9P2T1 348 aaKnown RBP12.94□□□□□ -0.34
TSR1-202ENST00000571806 RNF7Q9UBF6 113 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 CYB5R1Q9UHQ9 305 aa12.94□□□□□ -0.34
TSR1-202ENST00000571806 TRRAPQ9Y4A5 3859 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 TRBV4-1A0A0J9YWV2 114 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 FAM181BA6NEQ2 426 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 ZNF879B4DU55 563 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 TNFRSF13BO14836 293 aaPredicted RBP12.93□□□□□ -0.34
TSR1-202ENST00000571806 FAM20BO75063 409 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 NDUFA7O95182 113 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 PTBP3O95758 552 aaKnown RBP12.93□□□□□ -0.34
TSR1-202ENST00000571806 IFNGR2P38484 337 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 SF3A3Q12874 501 aaKnown RBP eCLIP12.93□□□□□ -0.342e-7■■■□□ 17.7
TSR1-202ENST00000571806 TRAP1Q12931 704 aaKnown RBP12.93□□□□□ -0.34
TSR1-202ENST00000571806 PDCD1Q15116 288 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 OR8G1Q15617 311 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 CLEC12AQ5QGZ9 265 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 FAM201AQ5SY85 155 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 GLYATQ6IB77 296 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 LYPD2Q6UXB3 125 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 MRPL21Q7Z2W9 205 aaKnown RBP12.93□□□□□ -0.34
TSR1-202ENST00000571806 FANK1Q8TC84 345 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 GATAD2BQ8WXI9 593 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 SLCO4A1Q96BD0 722 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 TECTBQ96PL2 329 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 NMNAT3Q96T66 252 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 TRIM15Q9C019 465 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 OR52D1Q9H346 318 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 CCDC134Q9H6E4 229 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 RPRD1BQ9NQG5 326 aaKnown RBP12.93□□□□□ -0.34
TSR1-202ENST00000571806 ABCD2Q9UBJ2 740 aa12.93□□□□□ -0.34
TSR1-202ENST00000571806 TRAV38-1A0A0B4J264 116 aa12.92□□□□□ -0.34
TSR1-202ENST00000571806 IGHV3-64DA0A0J9YX35 117 aa12.92□□□□□ -0.34
TSR1-202ENST00000571806 TOX4O94842 621 aa12.92□□□□□ -0.34
TSR1-202ENST00000571806 GADD45GO95257 159 aa12.92□□□□□ -0.34
TSR1-202ENST00000571806 HLA-DQA2P01906 255 aa12.92□□□□□ -0.34
TSR1-202ENST00000571806 NCK1P16333 377 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms