RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 STARP49675 285 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 ZNF84P51523 738 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 MAB21L1Q13394 359 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 CDH24Q86UP0 819 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 COMMD2Q86X83 199 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 OR52N4Q8NGI2 321 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 OR10D3Q8NH80 312 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 GIMAP1Q8WWP7 306 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 PTX4Q96A99 478 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 FAM173AQ9BQD7 235 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 OR51J1Q9H342 316 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 CNTD2Q9H8S5 307 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 GPR84Q9NQS5 396 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 TAS2R8Q9NYW2 309 aa15.99■□□□□ 0.15
SMPD3-211ENST00000568373 ZNF716A6NP11 495 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 PEX14O75381 377 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 ZNF20P17024 532 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 RAB3AP20336 220 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 CCL1P22362 96 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 ANOS1P23352 680 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 STOMP27105 288 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 GFRA1P56159 465 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 GALK2Q01415 458 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 IFITM2Q01629 132 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 PCGF3Q3KNV8 242 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 NCCRP1Q6ZVX7 275 aaPredicted RBP15.98■□□□□ 0.15
SMPD3-211ENST00000568373 FAM57BQ71RH2 274 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 ZNF775Q96BV0 537 aaPredicted RBP15.98■□□□□ 0.15
SMPD3-211ENST00000568373 SIGLEC12Q96PQ1 595 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 UQCC2Q9BRT2 126 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 UTP23Q9BRU9 249 aaKnown RBP15.98■□□□□ 0.15
SMPD3-211ENST00000568373 METTL17Q9H7H0 456 aaPredicted RBP15.98■□□□□ 0.15
SMPD3-211ENST00000568373 NKIRAS2Q9NYR9 191 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 ABI3Q9P2A4 366 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 IL17BQ9UHF5 180 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 DMXL1Q9Y485 3027 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 SDHBP21912 280 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 ITGA3P26006 1051 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 PRSS3P35030 304 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 CLDN15P56746 228 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 HIST1H3AP68431 136 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 FCN2Q15485 313 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 HIST2H3PS2Q5TEC6 136 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 ABLIM2Q6H8Q1 611 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 HIST2H3AQ71DI3 136 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 LRRC18Q8N456 261 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 SLC22A24Q8N4F4 322 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 OR2M7Q8NG81 312 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 OR13C9Q8NGT0 318 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 ROBO4Q8WZ75 1007 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 SLC5A6Q9Y289 635 aa15.98■□□□□ 0.15
SMPD3-211ENST00000568373 A0A0A6YYH2 397 aa15.97■□□□□ 0.15
SMPD3-211ENST00000568373 A6NJ64 397 aa15.97■□□□□ 0.15
SMPD3-211ENST00000568373 C1QBP02746 253 aa15.97■□□□□ 0.15
SMPD3-211ENST00000568373 CSF1P09603 554 aa15.97■□□□□ 0.15
SMPD3-211ENST00000568373 RAB6AP20340 208 aa15.97■□□□□ 0.15
SMPD3-211ENST00000568373 FAUP35544 74 aaKnown RBP15.97■□□□□ 0.15
SMPD3-211ENST00000568373 MRPS34P82930 218 aaKnown RBP15.97■□□□□ 0.15
SMPD3-211ENST00000568373 GUCA2AQ02747 115 aa15.97■□□□□ 0.15
SMPD3-211ENST00000568373 AIMP2Q13155 320 aaKnown RBP15.97■□□□□ 0.15
SMPD3-211ENST00000568373 TRIP6Q15654 476 aaKnown RBP15.97■□□□□ 0.15
SMPD3-211ENST00000568373 CD276Q5ZPR3 534 aa15.97■□□□□ 0.15
SMPD3-211ENST00000568373 FAAP20Q6NZ36 180 aa15.97■□□□□ 0.15
SMPD3-211ENST00000568373 LIX1LQ8IVB5 337 aa15.97■□□□□ 0.15
SMPD3-211ENST00000568373 SUMF1Q8NBK3 374 aa15.97■□□□□ 0.15
SMPD3-211ENST00000568373 ZNF837Q96EG3 531 aaPredicted RBP15.97■□□□□ 0.15
SMPD3-211ENST00000568373 IP6K3Q96PC2 410 aa15.97■□□□□ 0.15
SMPD3-211ENST00000568373 SOX7Q9BT81 388 aa15.97■□□□□ 0.15
SMPD3-211ENST00000568373 ZFHX2Q9C0A1 2572 aaPredicted RBP15.97■□□□□ 0.15
SMPD3-211ENST00000568373 ERCC1P07992 297 aaPredicted RBP15.96■□□□□ 0.15
SMPD3-211ENST00000568373 ABOP16442 354 aa15.96■□□□□ 0.15
SMPD3-211ENST00000568373 NTF4P34130 210 aa15.96■□□□□ 0.15
SMPD3-211ENST00000568373 FAM27BQ5VT28 67 aa15.96■□□□□ 0.15
SMPD3-211ENST00000568373 OR10K2Q6IF99 312 aa15.96■□□□□ 0.15
SMPD3-211ENST00000568373 DOK3Q7L591 496 aa15.96■□□□□ 0.15
SMPD3-211ENST00000568373 FAM71F1Q96KD3 344 aaPredicted RBP15.96■□□□□ 0.15
SMPD3-211ENST00000568373 TRAF4Q9BUZ4 470 aaPredicted RBP15.96■□□□□ 0.15
SMPD3-211ENST00000568373 ZNF703Q9H7S9 590 aaPredicted RBP15.96■□□□□ 0.15
SMPD3-211ENST00000568373 PAQR5Q9NXK6 330 aaPredicted RBP15.96■□□□□ 0.15
SMPD3-211ENST00000568373 MYEF2Q9P2K5 600 aaKnown RBP15.96■□□□□ 0.15
SMPD3-211ENST00000568373 FLVCR2Q9UPI3 526 aa15.96■□□□□ 0.15
SMPD3-211ENST00000568373 LINC01387J3KSC0 135 aa15.96■□□□□ 0.15
SMPD3-211ENST00000568373 ERP29P30040 261 aaKnown RBP15.96■□□□□ 0.15
SMPD3-211ENST00000568373 GZMKP49863 264 aa15.96■□□□□ 0.15
SMPD3-211ENST00000568373 SSBP1Q04837 148 aaKnown RBP15.96■□□□□ 0.15
SMPD3-211ENST00000568373 OR1C1Q15619 314 aa15.96■□□□□ 0.15
SMPD3-211ENST00000568373 ST3GAL2Q16842 350 aa15.96■□□□□ 0.15
SMPD3-211ENST00000568373 CCDC92Q53HC0 331 aaPredicted RBP15.96■□□□□ 0.15
SMPD3-211ENST00000568373 PGAP1Q75T13 922 aa15.96■□□□□ 0.15
SMPD3-211ENST00000568373 ZNF627Q7L945 461 aa15.96■□□□□ 0.15
SMPD3-211ENST00000568373 OR11H7Q8NGC8 314 aa15.96■□□□□ 0.15
SMPD3-211ENST00000568373 GPX8Q8TED1 209 aa15.96■□□□□ 0.15
SMPD3-211ENST00000568373 CPNE4Q96A23 557 aaPredicted RBP15.96■□□□□ 0.15
SMPD3-211ENST00000568373 GAL3ST1Q99999 423 aa15.96■□□□□ 0.15
SMPD3-211ENST00000568373 OR10A4Q9H209 315 aa15.96■□□□□ 0.15
SMPD3-211ENST00000568373 EMC3Q9P0I2 261 aa15.96■□□□□ 0.15
SMPD3-211ENST00000568373 MED13Q9UHV7 2174 aa15.95■□□□□ 0.14
SMPD3-211ENST00000568373 OR5H15A6NDH6 313 aa15.95■□□□□ 0.14
SMPD3-211ENST00000568373 SULT1C2O00338 296 aa15.95■□□□□ 0.14
SMPD3-211ENST00000568373 OTX1P32242 354 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms