RNA–Protein interactions for RNA: ENST00000563858.5

NUP93-208, Transcript of nucleoporin 93, human

TSL 5

Gene NUP93, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP93-208	ENST00000563858	APH1B	Q8WW43	257 aa		13.73	□□□□□ -0.21
NUP93-208	ENST00000563858	GTF3A	Q92664	365 aa	Known RBP	13.73	□□□□□ -0.21
NUP93-208	ENST00000563858	KCNN2	Q9H2S1	579 aa		13.73	□□□□□ -0.21
NUP93-208	ENST00000563858	MARCH7	Q9H992	704 aa		13.73	□□□□□ -0.21
NUP93-208	ENST00000563858	MOV10	Q9HCE1	1003 aa	Known RBP	13.73	□□□□□ -0.21
NUP93-208	ENST00000563858	FBXO9	Q9UK97	447 aa	Predicted RBP	13.73	□□□□□ -0.21
NUP93-208	ENST00000563858	WNK2	Q9Y3S1	2297 aa		13.73	□□□□□ -0.21
NUP93-208	ENST00000563858	TRRAP	Q9Y4A5	3859 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	LOC105371242	A0A075B767	164 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	IRGM	A1A4Y4	181 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	CCDC182	A6NF36	153 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	CDC14B	O60729	498 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	WBP4	O75554	376 aa	Known RBP	13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	CCL2	P13500	99 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	ZNF823	P16415	610 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	ACHE	P22303	614 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	RBMX	P38159	391 aa	Known RBP	13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	MTNR1A	P48039	350 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	ERVS71-1	P61550	626 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	AVPI1	Q5T686	147 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	FAM27B	Q5VT28	67 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	BCDIN3D	Q7Z5W3	292 aa	Known RBP	13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	SLC22A24	Q8N4F4	322 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	CNIH3	Q8TBE1	160 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	RDH5	Q92781	318 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	NABP1	Q96AH0	204 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	FAHD2A	Q96GK7	314 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	MS4A5	Q9H3V2	200 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	POLE4	Q9NR33	117 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	PLCXD1	Q9NUJ7	323 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	DUSP13	Q9UII6	198 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	PCDHGB1	Q9Y5G3	927 aa		13.72	□□□□□ -0.21
NUP93-208	ENST00000563858	PPIH	O43447	177 aa	Known RBP	13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	CST2	P09228	141 aa		13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	PCBD1	P61457	104 aa		13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	SGCA	Q16586	387 aa		13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	KLHL22	Q53GT1	634 aa		13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	TEX30	Q5JUR7	227 aa		13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	C6orf141	Q5SZD1	244 aa		13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	SHF	Q7M4L6	423 aa		13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	SYT9	Q86SS6	491 aa		13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	OR51L1	Q8NGJ5	315 aa		13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	ZMYND19	Q96E35	227 aa	Predicted RBP	13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	INTS14	Q96SY0	518 aa		13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	MNT	Q99583	582 aa		13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	OR51B6	Q9H340	312 aa		13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	G6PC2	Q9NQR9	355 aa		13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	MRPS18A	Q9NVS2	196 aa	Known RBP	13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	SCN3B	Q9NY72	215 aa		13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	LRCH1	Q9Y2L9	728 aa		13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	CACNG2	Q9Y698	323 aa		13.71	□□□□□ -0.21
NUP93-208	ENST00000563858	PKD1L1	Q8TDX9	2849 aa		13.71	□□□□□ -0.22
NUP93-208	ENST00000563858	TMEM89	A2RUT3	159 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	C12orf71	A8MTZ7	269 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	CCDC159	P0C7I6	412 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	FAM157B	P0CG42	384 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	DBT	P11182	482 aa	Known RBP	13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	ADRA2C	P18825	462 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	CDA	P32320	146 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	ATP6V1E1	P36543	226 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	COMP	P49747	757 aa	Predicted RBP	13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	ENTPD1	P49961	510 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	ZNF91	Q05481	1191 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	RAB40B	Q12829	278 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	RBM48	Q5RL73	367 aa	Known RBP	13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	SLC16A9	Q7RTY1	509 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	PEG10	Q86TG7	708 aa	Known RBP	13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	TIGD4	Q8IY51	512 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	ZNRF4	Q8WWF5	429 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	C11orf40	Q8WZ69	217 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	MYCBP	Q99417	103 aa	Predicted RBP	13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	CNN2	Q99439	309 aa	Known RBP	13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	SH3GL3	Q99963	347 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	CDADC1	Q9BWV3	514 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	YIPF3	Q9GZM5	350 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	ESM1	Q9NQ30	184 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	CNOT2	Q9NZN8	540 aa	Known RBP	13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	BLOC1S6	Q9UL45	172 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	POLR1D	Q9Y2S0	133 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	TMEM14A	Q9Y6G1	99 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	COMMD3-BMI1	R4GMX3	469 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858	MGAM2	Q2M2H8	2515 aa		13.7	□□□□□ -0.22
NUP93-208	ENST00000563858		A0A0A6YYJ9	748 aa		13.69	□□□□□ -0.22
NUP93-208	ENST00000563858	EFCAB10	A6NFE3	127 aa		13.69	□□□□□ -0.22
NUP93-208	ENST00000563858	UBL3	O95164	117 aa		13.69	□□□□□ -0.22
NUP93-208	ENST00000563858	TF	P02787	698 aa		13.69	□□□□□ -0.22
NUP93-208	ENST00000563858	PIP	P12273	146 aa	Predicted RBP	13.69	□□□□□ -0.22
NUP93-208	ENST00000563858	TMEM33	P57088	247 aa		13.69	□□□□□ -0.22
NUP93-208	ENST00000563858	ACTG1	P63261	375 aa		13.69	□□□□□ -0.22
NUP93-208	ENST00000563858	CCL8	P80075	99 aa		13.69	□□□□□ -0.22
NUP93-208	ENST00000563858	MVK	Q03426	396 aa		13.69	□□□□□ -0.22
NUP93-208	ENST00000563858	AQP6	Q13520	282 aa		13.69	□□□□□ -0.22
NUP93-208	ENST00000563858	PCK2	Q16822	640 aa		13.69	□□□□□ -0.22
NUP93-208	ENST00000563858	SLC36A2	Q495M3	483 aa		13.69	□□□□□ -0.22
NUP93-208	ENST00000563858	TMEM255A	Q5JRV8	349 aa		13.69	□□□□□ -0.22
NUP93-208	ENST00000563858	SLC16A14	Q7RTX9	510 aa		13.69	□□□□□ -0.22
NUP93-208	ENST00000563858	ERI1	Q8IV48	349 aa	Known RBP	13.69	□□□□□ -0.22
NUP93-208	ENST00000563858	ZNF454	Q8N9F8	522 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms