RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 MT-ATP6P00846 226 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 H1F0P07305 194 aaKnown RBP3.92□□□□□ -1.78
SMG1-206ENST00000562668 UMPSP11172 480 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 IFI30P13284 250 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 PAX1P15863 534 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 COX5AP20674 150 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 CBLP22681 906 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 RRM2P31350 389 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 OR3A2P47893 321 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 GSSP48637 474 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 ERFP50548 548 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 ASCL1P50553 236 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 SMSP52788 366 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 IST1P53990 364 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 SIRPAP78324 504 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.92□□□□□ -1.78
SMG1-206ENST00000562668 LGALS3BPQ08380 585 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 RASGEF1BQ0VAM2 473 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 PPP1R8Q12972 351 aaKnown RBP3.92□□□□□ -1.78
SMG1-206ENST00000562668 FLOT2Q14254 428 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 HIST3H3Q16695 136 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 EXOC3L2Q2M3D2 409 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 SLC25A35Q3KQZ1 300 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 ZNF876PQ49A33 203 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 PHYHD1Q5SRE7 291 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 OR2T5Q6IEZ7 315 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 C1orf94Q6P1W5 598 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 P4HA3Q7Z4N8 544 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 KRTAP7-1Q8IUC3 87 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 SLC43A2Q8N370 569 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 OR4K5Q8NGD3 323 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 OR9K2Q8NGE7 335 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 OR10V1Q8NGI7 309 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 OR2T29Q8NH02 315 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 OR5J2Q8NH18 312 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 MOSPD2Q8NHP6 518 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 PIGXQ8TBF5 258 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 POP5Q969H6 163 aaKnown RBP3.92□□□□□ -1.78
SMG1-206ENST00000562668 SLC25A36Q96CQ1 311 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 BPIFA2Q96DR5 249 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 SGTBQ96EQ0 304 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 C17orf77Q96MU5 243 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 OXGR1Q96P68 337 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 NAA11Q9BSU3 229 aaPredicted RBP3.92□□□□□ -1.78
SMG1-206ENST00000562668 FNDC11Q9BVV2 318 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 CHID1Q9BWS9 393 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 TRIM15Q9C019 465 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 PIGMQ9H3S5 423 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 DENND2DQ9H6A0 471 aaPredicted RBP3.92□□□□□ -1.78
SMG1-206ENST00000562668 MCCC2Q9HCC0 563 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 TIGARQ9NQ88 270 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 ARMC1Q9NVT9 282 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 KLHL9Q9P2J3 617 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 RASD1Q9Y272 281 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 SIGLEC7Q9Y286 467 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 MED31Q9Y3C7 131 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 OR2W1Q9Y3N9 320 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 PTPN13Q12923 2485 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 BAHCC1Q9P281 2608 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 RAI1Q7Z5J4 1906 aaPredicted RBP3.91□□□□□ -1.78
SMG1-206ENST00000562668 COL12A1Q99715 3063 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 DIDO1Q9BTC0 2240 aaKnown RBP3.91□□□□□ -1.78
SMG1-206ENST00000562668 CSMD1Q96PZ7 3565 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 HRNRQ86YZ3 2850 aaPredicted RBP3.91□□□□□ -1.78
SMG1-206ENST00000562668 TEX22C9J3V5 150 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 E9PQ18 207 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 RPL36A-HNRNPH2H7BZ11 118 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 GMNNO75496 209 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 UPK3AO75631 287 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 GADD45GO95257 159 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 IGHMP01871 453 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 TFP02787 698 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 NQO1P15559 274 aaKnown RBP3.91□□□□□ -1.78
SMG1-206ENST00000562668 IGHV1-2P23083 117 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 LOXP28300 417 aaPredicted RBP3.91□□□□□ -1.78
SMG1-206ENST00000562668 BDKRB2P30411 391 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 FBN2P35556 2912 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 AQP2P41181 271 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 GPR4P46093 362 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 SLC9A3P48764 834 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 ZNF133P52736 654 aaPredicted RBP3.91□□□□□ -1.78
SMG1-206ENST00000562668 VAMP2P63027 116 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 SPIBQ01892 262 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 CHRNB3Q05901 458 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 RUNX1T1Q06455 604 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 RPL18Q07020 188 aaKnown RBP3.91□□□□□ -1.78
SMG1-206ENST00000562668 PUDPQ08623 228 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 FOXD4Q12950 439 aaPredicted RBP3.91□□□□□ -1.78
SMG1-206ENST00000562668 MICAQ29983 383 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 FAM98BQ52LJ0 330 aaKnown RBP3.91□□□□□ -1.78
SMG1-206ENST00000562668 ARMC4Q5T2S8 1044 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 TSPO2Q5TGU0 170 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 EEF1A1P5Q5VTE0 462 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 STAC2Q6ZMT1 411 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 Q6ZT83 130 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 CHMP1BQ7LBR1 199 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 FAM122BQ7Z309 247 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 PXKQ7Z7A4 578 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 GALNT5Q7Z7M9 940 aa3.91□□□□□ -1.78
SMG1-206ENST00000562668 LUZP2Q86TE4 346 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms