RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 DUX4L5P0CJ88 424 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 DUX4L6P0CJ89 424 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 DUX4L7P0CJ90 424 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 KITP10721 976 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 CD247P20963 164 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 EEF1B2P24534 225 aaKnown RBP7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 SAA4P35542 130 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 RGS6P49758 472 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 CTXN1P60606 82 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 LCN6P62502 163 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 GUCA2AQ02747 115 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 MPP2Q14168 576 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 RSPO1Q2MKA7 263 aaPredicted RBP7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 INTS11Q5TA45 600 aaKnown RBP7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 DUX4L9Q6RFH8 374 aaPredicted RBP7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 FAM90A1Q86YD7 464 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 FUNDC1Q8IVP5 155 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 BEND2Q8NDZ0 799 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 OR4C13Q8NGP0 309 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 WIPF2Q8TF74 440 aaPredicted RBP7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 C17orf50Q8WW18 174 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 ST8SIA4Q92187 359 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 RORBQ92753 470 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 TNFRSF14Q92956 283 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 APOBEC3DQ96AK3 386 aaPredicted RBP7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 CLPTM1LQ96KA5 538 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 OR52B2Q96RD2 323 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 ROPN1BQ9BZX4 212 aaPredicted RBP7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 RANBP3Q9H6Z4 567 aaPredicted RBP7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 ROPN1Q9HAT0 212 aaPredicted RBP7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 SERTAD4Q9NUC0 356 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 ONECUT1Q9UBC0 465 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 KAAG1Q9UBP8 84 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 DUX4Q9UBX2 424 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 HIF3AQ9Y2N7 669 aa7.29□□□□□ -1.24
RABGGTA-217ENST00000560521 TRAV38-1A0A0B4J264 116 aa7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 PTBP3O95758 552 aaKnown RBP7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 LHBP01229 141 aa7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 PPIBP23284 216 aaKnown RBP7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 RBM34P42696 430 aaKnown RBP7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 ELF3P78545 371 aaPredicted RBP7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 AQP6Q13520 282 aa7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 FHL1Q13642 323 aa7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 HABP2Q14520 560 aaPredicted RBP7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 BEND6Q5SZJ8 279 aaPredicted RBP7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 ZNF826PQ6ZT77 177 aa7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 MAVSQ7Z434 540 aa7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 GCSAMQ8N6F7 178 aa7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 PAPD5Q8NDF8 572 aaKnown RBP7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 AENQ8WTP8 325 aaKnown RBP7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 TMEM239Q8WW34 195 aa7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 AJUBAQ96IF1 538 aa7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 ZNF583Q96ND8 569 aa7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 CPPED1Q9BRF8 314 aaPredicted RBP7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 HUWE1Q7Z6Z7 4374 aaKnown RBP7.28□□□□□ -1.24
RABGGTA-217ENST00000560521 IGHV3OR15-7A0A075B7D8 119 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 EVPLLA8MZ36 301 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 C3orf84H3BNL1 204 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 RER1O15258 196 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 CHST1O43916 411 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 SNNO75324 88 aaPredicted RBP7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 ZNF26P17031 533 aaPredicted RBP7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 PAX6P26367 422 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 UBE2E1P51965 193 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 IFFO1Q0D2I5 559 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 GK2Q14410 553 aaPredicted RBP7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 TEX36Q5VZQ5 186 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 BLOC1S3Q6QNY0 202 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 COLCA1Q6ZS62 124 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 NAA40Q86UY6 237 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 SLC7A13Q8TCU3 470 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 TAMM41Q96BW9 452 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 DMRTB1Q96MA1 342 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 MEGF9Q9H1U4 602 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 CENPHQ9H3R5 247 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 ZNF702PQ9H963 129 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 FN3KRPQ9HA64 309 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 TRIM36Q9NQ86 728 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 RIMS3Q9UJD0 308 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 CORO2BQ9UQ03 480 aa7.27□□□□□ -1.25
RABGGTA-217ENST00000560521 TEX13CA0A0J9YWL9 993 aa7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 A6NIZ1 184 aa7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 CTLA4P16410 223 aa7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 TNFRSF1BP20333 461 aa7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 CA6P23280 308 aa7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 RPL4P36578 427 aaKnown RBP7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 CRYBA2P53672 197 aa7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 RAP1BP61224 184 aa7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 LSM6P62312 80 aaKnown RBP7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 RAP1AP62834 184 aa7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 HIST1H3AP68431 136 aa7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 EGFEM1PQ0D2K5 195 aa7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 PIN1Q13526 163 aaPredicted RBP7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 SELPLGQ14242 412 aa7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 HIST2H3PS2Q5TEC6 136 aa7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 HCP5Q6MZN7 132 aa7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 WDR93Q6P2C0 686 aa7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 DLEU7Q6UYE1 221 aa7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 HIST2H3AQ71DI3 136 aa7.26□□□□□ -1.25
RABGGTA-217ENST00000560521 MICU2Q8IYU8 434 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms