RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CALCRP30988 508 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 UGT2B10P36537 528 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 LIPAP38571 399 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 OPRL1P41146 370 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 KIR3DL2P43630 455 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 HTR5AP47898 357 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 CX3CR1P49238 355 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 ZNF83P51522 516 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 IDH3GP51553 393 aaPredicted RBP4.52□□□□□ -1.69
SPG11-220ENST00000559933 ERVS71-1P61550 626 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 RPS25P62851 125 aaKnown RBP4.52□□□□□ -1.69
SPG11-220ENST00000559933 RPL11P62913 178 aaKnown RBP4.52□□□□□ -1.69
SPG11-220ENST00000559933 ACTC1P68032 377 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 ACTA1P68133 377 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 GALK2Q01415 458 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 PLP2Q04941 152 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 HNRNPA0Q13151 305 aaKnown RBP4.52□□□□□ -1.69
SPG11-220ENST00000559933 AQP6Q13520 282 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 GALEQ14376 348 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 SF3B4Q15427 424 aaKnown RBP eCLIP4.52□□□□□ -1.69
SPG11-220ENST00000559933 TAB1Q15750 504 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 TBCEQ15813 527 aaPredicted RBP4.52□□□□□ -1.69
SPG11-220ENST00000559933 SSX1Q16384 188 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 TSTQ16762 297 aaKnown RBP4.52□□□□□ -1.69
SPG11-220ENST00000559933 PCK2Q16822 640 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 RSPO1Q2MKA7 263 aaPredicted RBP4.52□□□□□ -1.69
SPG11-220ENST00000559933 GFOD2Q3B7J2 385 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 CDONQ4KMG0 1287 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 KLHL22Q53GT1 634 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 WDR38Q5JTN6 314 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 SPATA46Q5T0L3 261 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 FAM27BQ5VT28 67 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 TMEM211Q6ICI0 200 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 ANKRD16Q6P6B7 361 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 ABHD12BQ7Z5M8 362 aaPredicted RBP4.52□□□□□ -1.69
SPG11-220ENST00000559933 KRT77Q7Z794 578 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 MRGPRGQ86SM5 289 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 SATL1Q86VE3 508 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 RDH10Q8IZV5 341 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 ACBD7Q8N6N7 88 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 NANOGP1Q8N7R0 232 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 YIPF7Q8N8F6 280 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 OR2AJ1Q8NGZ0 328 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 OR2T27Q8NH04 317 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 OR10AC1Q8NH08 325 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 LINC01560Q8TB33 94 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 FNDC8Q8TC99 324 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 SNX33Q8WV41 574 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 RNF133Q8WVZ7 376 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 IPCEF1Q8WWN9 437 aaPredicted RBP4.52□□□□□ -1.69
SPG11-220ENST00000559933 RGP1Q92546 391 aaPredicted RBP4.52□□□□□ -1.69
SPG11-220ENST00000559933 MUL1Q969V5 352 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 ORAI1Q96D31 301 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 ZNF75AQ96N20 296 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 CDCA4Q9BXL8 241 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 YTHDF1Q9BYJ9 559 aaKnown RBP4.52□□□□□ -1.69
SPG11-220ENST00000559933 MRPS26Q9BYN8 205 aaKnown RBP4.52□□□□□ -1.69
SPG11-220ENST00000559933 YIPF3Q9GZM5 350 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 PIGMQ9H3S5 423 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 C1orf198Q9H425 327 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 RNF167Q9H6Y7 350 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 B3GNT2Q9NY97 397 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 PLEK2Q9NYT0 353 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 ZNF319Q9P2F9 582 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 ZNF629Q9UEG4 869 aaPredicted RBP4.52□□□□□ -1.69
SPG11-220ENST00000559933 ST6GALNAC2Q9UJ37 374 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 BLOC1S6Q9UL45 172 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 SNX5Q9Y5X3 404 aa4.52□□□□□ -1.69
SPG11-220ENST00000559933 ABCA12Q86UK0 2595 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 MYO18BQ8IUG5 2567 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 A0A087WXM4 84 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 IGHV1-18A0A0C4DH31 117 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 TMEM129A0AVI4 362 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 A1L4Q6 167 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 C5orf49A4QMS7 147 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 OR6C6A6NF89 314 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 METTL15A6NJ78 407 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 OR6C65A6NJZ3 312 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 OR5H1A6NKK0 313 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 TRIM64CA6NLI5 447 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 SNTNA6NMZ2 147 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 ZNF878C9JN71 531 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 F5H5K5 113 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 M0R1B8 84 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 TBX1O43435 398 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 SYNGR3O43761 229 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 SRSF10O75494 262 aaKnown RBP4.51□□□□□ -1.69
SPG11-220ENST00000559933 FARS2O95363 451 aaKnown RBP4.51□□□□□ -1.69
SPG11-220ENST00000559933 PLA2G1BP04054 148 aaKnown RBP4.51□□□□□ -1.69
SPG11-220ENST00000559933 TFAP2AP05549 437 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 KRT8P05787 483 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 H2BFMP0C1H6 154 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 CECR9P0C854 216 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 PLA2G2AP14555 144 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 ZNF14P17017 642 aaPredicted RBP4.51□□□□□ -1.69
SPG11-220ENST00000559933 CRYGSP22914 178 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 DCKP27707 260 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 HOXC12P31275 282 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 TGFBR2P37173 567 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 RBMXP38159 391 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms