RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 VSIG10L2P0DP72 767 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 ENPP1P22413 925 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 IGFBP4P22692 258 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 NFYBP25208 207 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 TAS2R46P59540 309 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 MFGE8Q08431 387 aaPredicted RBP6.44□□□□□ -1.38
USP3-210ENST00000559192 PPP1R1AQ13522 171 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 SERTAD2Q14140 314 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 TESK1Q15569 626 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 FAM74A3Q4VXF1 159 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 PWWP2BQ6NUJ5 590 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 TMEM182Q6ZP80 229 aaPredicted RBP6.44□□□□□ -1.38
USP3-210ENST00000559192 CMTM1Q8IZ96 169 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 FAM160A2Q8N612 972 aaPredicted RBP6.44□□□□□ -1.38
USP3-210ENST00000559192 TMEM229BQ8NBD8 167 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 WNT2BQ93097 391 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 CMTM3Q96MX0 182 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 SH3BGRL2Q9UJC5 107 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 SERTAD3Q9UJW9 196 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 SLC7A11Q9UPY5 501 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 H7BYZ3 331 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 GPR137BO60478 399 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 QDPRP09417 244 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 ZGLP1P0C6A0 271 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 RPA2P15927 270 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 BLVRBP30043 206 aaPredicted RBP6.43□□□□□ -1.38
USP3-210ENST00000559192 KRTDAPP60985 99 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 EGR3Q06889 387 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 ZNF273Q14593 569 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 ARL6IP1Q15041 203 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 IQCJQ1A5X6 159 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 WDR38Q5JTN6 314 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 MANEAQ5SRI9 462 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 CD200R1LQ6Q8B3 271 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 CPEB2Q7Z5Q1 589 aaKnown RBP6.43□□□□□ -1.38
USP3-210ENST00000559192 COMMD1Q8N668 190 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 C15orf54Q8N8G6 183 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 REEP6Q96HR9 211 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 NICN1Q9BSH3 213 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 LYRM2Q9NU23 88 aaPredicted RBP6.43□□□□□ -1.38
USP3-210ENST00000559192 MSTNO14793 375 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 HCRTR1O43613 425 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 SEMA4FO95754 770 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 NMBP08949 121 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 ZNF43P17038 809 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 ZP1P60852 638 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 RPL27P61353 136 aaKnown RBP6.43□□□□□ -1.38
USP3-210ENST00000559192 RAB11AP62491 216 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 ACKR1Q16570 336 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 SLC24A4Q8NFF2 622 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 ZPLD1Q8TCW7 415 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 IL23AQ9NPF7 189 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 DNAJB12Q9NXW2 375 aaKnown RBP6.43□□□□□ -1.38
USP3-210ENST00000559192 THAP10Q9P2Z0 257 aaPredicted RBP6.43□□□□□ -1.38
USP3-210ENST00000559192 OGG1O15527 345 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 WNT11O96014 354 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 TIMP1P01033 207 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 PDGFBP01127 241 aaPredicted RBP6.43□□□□□ -1.38
USP3-210ENST00000559192 GLI4P10075 376 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 FOLR1P15328 257 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 CDKN2AP42771 156 aaKnown RBP6.43□□□□□ -1.38
USP3-210ENST00000559192 EFNB2P52799 333 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 FABP9Q0Z7S8 132 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 UBXN2BQ14CS0 331 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 LBHQ53QV2 105 aaPredicted RBP6.43□□□□□ -1.38
USP3-210ENST00000559192 TOMM20LQ6UXN7 152 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 WDR88Q6ZMY6 472 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 ZNF595Q8IYB9 648 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 SUMF1Q8NBK3 374 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 OR56B1Q8NGI3 324 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 KTI12Q96EK9 354 aaPredicted RBP6.43□□□□□ -1.38
USP3-210ENST00000559192 GAS2L1Q99501 681 aaPredicted RBP6.43□□□□□ -1.38
USP3-210ENST00000559192 RSRP1Q9BUV0 290 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 RBM24Q9BX46 236 aaKnown RBP6.43□□□□□ -1.38
USP3-210ENST00000559192 OR10A2Q9H208 303 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 MRPS2Q9Y399 296 aaKnown RBP6.43□□□□□ -1.38
USP3-210ENST00000559192 SCGB2A1O75556 95 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 AKR7A3O95154 331 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 OLFM2O95897 454 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 CEACAM5P06731 702 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 CT62P0C5K7 136 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 RAB1AP62820 205 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 PCK2Q16822 640 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 DEFB133Q30KQ1 61 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 PHLDA2Q53GA4 152 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 FAM209BQ5JX69 171 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 NKAIN2Q5VXU1 208 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 OGFOD3Q6PK18 319 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 OVCH2Q7RTZ1 564 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 STPG2Q8N412 459 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 NKAIN3Q8N8D7 197 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 OR51E1Q8TCB6 317 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 UBL7Q96S82 380 aaPredicted RBP6.43□□□□□ -1.38
USP3-210ENST00000559192 SLC39A9Q9NUM3 307 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 FLRT3Q9NZU0 649 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 MGAMO43451 1857 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 ZFP92A6NM28 416 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 BET1O15155 118 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 GALR3O60755 368 aaPredicted RBP6.43□□□□□ -1.38
USP3-210ENST00000559192 LRP3O75074 770 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms