RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 SLC3A1Q07837 685 aa15.67■□□□□ 0.1
CLPX-203ENST00000558958 TBC1D28Q2M2D7 210 aa15.67■□□□□ 0.1
CLPX-203ENST00000558958 PAQR4Q8N4S7 273 aaPredicted RBP15.67■□□□□ 0.1
CLPX-203ENST00000558958 YIPF6Q96EC8 236 aa15.67■□□□□ 0.1
CLPX-203ENST00000558958 PGLYRP3Q96LB9 341 aa15.67■□□□□ 0.1
CLPX-203ENST00000558958 PBOV1Q9GZY1 135 aa15.67■□□□□ 0.1
CLPX-203ENST00000558958 NDUFB11Q9NX14 153 aa15.67■□□□□ 0.1
CLPX-203ENST00000558958 NUFIP1Q9UHK0 495 aaKnown RBP15.67■□□□□ 0.1
CLPX-203ENST00000558958 ANXA2P07355 339 aaKnown RBP15.66■□□□□ 0.1
CLPX-203ENST00000558958 CD36P16671 472 aa15.66■□□□□ 0.1
CLPX-203ENST00000558958 CD53P19397 219 aa15.66■□□□□ 0.1
CLPX-203ENST00000558958 CCNOP22674 350 aa15.66■□□□□ 0.1
CLPX-203ENST00000558958 ANOS1P23352 680 aa15.66■□□□□ 0.1
CLPX-203ENST00000558958 ZNF83P51522 516 aa15.66■□□□□ 0.1
CLPX-203ENST00000558958 BCL2L15Q5TBC7 163 aa15.66■□□□□ 0.1
CLPX-203ENST00000558958 ALKBH2Q6NS38 261 aa15.66■□□□□ 0.1
CLPX-203ENST00000558958 COLCA1Q6ZS62 124 aa15.66■□□□□ 0.1
CLPX-203ENST00000558958 FAM57BQ71RH2 274 aa15.66■□□□□ 0.1
CLPX-203ENST00000558958 ELMOD2Q8IZ81 293 aa15.66■□□□□ 0.1
CLPX-203ENST00000558958 OR1J2Q8NGS2 313 aa15.66■□□□□ 0.1
CLPX-203ENST00000558958 GHSRQ92847 366 aa15.66■□□□□ 0.1
CLPX-203ENST00000558958 PDCD1LG2Q9BQ51 273 aa15.66■□□□□ 0.1
CLPX-203ENST00000558958 MED18Q9BUE0 208 aa15.66■□□□□ 0.1
CLPX-203ENST00000558958 C1QTNF5Q9BXJ0 243 aa15.66■□□□□ 0.1
CLPX-203ENST00000558958 SF3B6Q9Y3B4 125 aaKnown RBP15.66■□□□□ 0.1
CLPX-203ENST00000558958 WIPF3A6NGB9 483 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 TMEM212A6NML5 194 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 TTRP02766 147 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 OR8B12Q8NGG6 310 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 OR5AK2Q8NH90 309 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 ZC3HAV1LQ96H79 300 aaKnown RBP15.65■□□□□ 0.1
CLPX-203ENST00000558958 PGAM5Q96HS1 289 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 SP140LQ9H930 580 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 CDH20Q9HBT6 801 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 NPDC1Q9NQX5 325 aaPredicted RBP15.65■□□□□ 0.1
CLPX-203ENST00000558958 ZNF319Q9P2F9 582 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 NDRG3Q9UGV2 375 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 N6AMT1Q9Y5N5 214 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 SPTBN1Q01082 2364 aaKnown RBP15.65■□□□□ 0.1
CLPX-203ENST00000558958 C5orf63A6NC05 138 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 M0R1B8 84 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 GPRIN2O60269 458 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 ICMTO60725 284 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 LCATP04180 440 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 ZNF35P13682 527 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 GABRA5P31644 462 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 WNT5AP41221 380 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 RPS25P62851 125 aaKnown RBP15.65■□□□□ 0.1
CLPX-203ENST00000558958 ZNF704Q6ZNC4 412 aaPredicted RBP15.65■□□□□ 0.1
CLPX-203ENST00000558958 WFDC8Q8IUA0 241 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 ZNF676Q8N7Q3 588 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 OR52H1Q8NGJ2 320 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 FUNDC2Q9BWH2 189 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 ZNF281Q9Y2X9 895 aa15.65■□□□□ 0.1
CLPX-203ENST00000558958 DPPA5A6NC42 116 aa15.64■□□□□ 0.09
CLPX-203ENST00000558958 ISG15P05161 165 aa15.64■□□□□ 0.09
CLPX-203ENST00000558958 SNTB1Q13884 538 aaKnown RBP15.64■□□□□ 0.09
CLPX-203ENST00000558958 ODF4Q2M2E3 257 aa15.64■□□□□ 0.09
CLPX-203ENST00000558958 SNAI3Q3KNW1 292 aa15.64■□□□□ 0.09
CLPX-203ENST00000558958 RDH10Q8IZV5 341 aa15.64■□□□□ 0.09
CLPX-203ENST00000558958 MS4A15Q8N5U1 240 aa15.64■□□□□ 0.09
CLPX-203ENST00000558958 TMEM203Q969S6 136 aa15.64■□□□□ 0.09
CLPX-203ENST00000558958 APOBEC3DQ96AK3 386 aaPredicted RBP15.64■□□□□ 0.09
CLPX-203ENST00000558958 TMED9Q9BVK6 235 aa15.64■□□□□ 0.09
CLPX-203ENST00000558958 COMMD4Q9H0A8 199 aa15.64■□□□□ 0.09
CLPX-203ENST00000558958 OR10A2Q9H208 303 aa15.64■□□□□ 0.09
CLPX-203ENST00000558958 TBCCD1Q9NVR7 557 aa15.64■□□□□ 0.09
CLPX-203ENST00000558958 IGHV2OR16-5A0A0B4J2B6 119 aa15.63■□□□□ 0.09
CLPX-203ENST00000558958 A0A0U1RQV5 110 aa15.63■□□□□ 0.09
CLPX-203ENST00000558958 TBX1O43435 398 aa15.63■□□□□ 0.09
CLPX-203ENST00000558958 UBCP0CG48 685 aaKnown RBP15.63■□□□□ 0.09
CLPX-203ENST00000558958 RPS11P62280 158 aaKnown RBP eCLIP15.63■□□□□ 0.09
CLPX-203ENST00000558958 NAAAQ02083 359 aa15.63■□□□□ 0.09
CLPX-203ENST00000558958 TRAM1Q15629 374 aa15.63■□□□□ 0.09
CLPX-203ENST00000558958 ZNF101Q8IZC7 436 aa15.63■□□□□ 0.09
CLPX-203ENST00000558958 LINC01560Q8TB33 94 aa15.63■□□□□ 0.09
CLPX-203ENST00000558958 RGP1Q92546 391 aaPredicted RBP15.63■□□□□ 0.09
CLPX-203ENST00000558958 USP9XQ93008 2570 aaPredicted RBP15.63■□□□□ 0.09
CLPX-203ENST00000558958 HCFC1P51610 2035 aa15.63■□□□□ 0.09
CLPX-203ENST00000558958 TUBAL3A6NHL2 446 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 H3BSA7 217 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 J3QW42 95 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 P2RY10O00398 339 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 NGFP01138 241 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 IGLV3-1P01715 115 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 RNF224P0DH78 156 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 PLA2G2AP14555 144 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 GADD45AP24522 165 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 PSMA1P25786 263 aaKnown RBP15.62■□□□□ 0.09
CLPX-203ENST00000558958 PCSK6P29122 969 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 CALCRP30988 508 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 CRYBB2P43320 205 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 SRSF1Q07955 248 aaKnown RBP eCLIP15.62■□□□□ 0.09
CLPX-203ENST00000558958 YIF1BQ5BJH7 314 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 TMEM244Q5VVB8 128 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 GPR107Q5VW38 600 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 CD200R1LQ6Q8B3 271 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 ABHD4Q8TB40 342 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 OR51E1Q8TCB6 317 aa15.62■□□□□ 0.09
CLPX-203ENST00000558958 SGK3Q96BR1 496 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms